Sample 3300029033

Overview

Basic Information
IMG/M Taxon OID	3300029033 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0127429 \| Gp0193711 \| Ga0169717
Sample Name	Human fecal microbial communities from mother in Denmark - 504_M
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	137534835
Sequencing Scaffolds	9
Novel Protein Genes	14
Associated Families	14

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → Tenericutes incertae sedis → Candidatus Izimaplasma → unclassified Candidatus Izimaplasma → Candidatus Izimaplasma sp. HR2	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated → Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Location Information
Location	Denmark
Coordinates	Lat. (^o)	55.678	Long. (^o)	12.531	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F032286	Metagenome / Metatranscriptome	180	Y
F032312	Metagenome / Metatranscriptome	180	N
F044555	Metagenome / Metatranscriptome	154	N
F051936	Metagenome	143	N
F056682	Metagenome	137	Y
F060985	Metagenome / Metatranscriptome	132	N
F064817	Metagenome	128	N
F074964	Metagenome	119	N
F080163	Metagenome	115	N
F088920	Metagenome	109	Y
F090513	Metagenome	108	N
F090514	Metagenome	108	N
F099406	Metagenome	103	N
F101357	Metagenome / Metatranscriptome	102	N

Family

Category

Number of Sequences

3D Structure?

F032286

Metagenome / Metatranscriptome

180

F032312

Metagenome / Metatranscriptome

180

F044555

Metagenome / Metatranscriptome

154

F051936

Metagenome

143

F056682

Metagenome

137

F060985

Metagenome / Metatranscriptome

132

F064817

Metagenome

128

F074964

Metagenome

119

F080163

Metagenome

115

F088920

Metagenome

109

F090513

Metagenome

108

F090514

Metagenome

108

F099406

Metagenome

103

F101357

Metagenome / Metatranscriptome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0169717_100040	Not Available	85498	Open in IMG/M
Ga0169717_100509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	22428	Open in IMG/M
Ga0169717_101240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	12114	Open in IMG/M
Ga0169717_104259	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	4887	Open in IMG/M
Ga0169717_112692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	2104	Open in IMG/M
Ga0169717_115384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → Tenericutes incertae sedis → Candidatus Izimaplasma → unclassified Candidatus Izimaplasma → Candidatus Izimaplasma sp. HR2	1784	Open in IMG/M
Ga0169717_121811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus	1310	Open in IMG/M
Ga0169717_127188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1070	Open in IMG/M
Ga0169717_158773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	501	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0169717_100040

Not Available

85498

Open in IMG/M

Ga0169717_100509

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

22428

Open in IMG/M

Ga0169717_101240

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

12114

Open in IMG/M

Ga0169717_104259

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia

4887

Open in IMG/M

Ga0169717_112692

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae

2104

Open in IMG/M

Ga0169717_115384

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → Tenericutes incertae sedis → Candidatus Izimaplasma → unclassified Candidatus Izimaplasma → Candidatus Izimaplasma sp. HR2

1784

Open in IMG/M

Ga0169717_121811

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus

1310

Open in IMG/M

Ga0169717_127188

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes

1070

Open in IMG/M

Ga0169717_158773

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae

501

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0169717_100040	Ga0169717_100040100	F044555	MKTTNPSSRITISQNGNQILTCKVYKEPNYILSMSNEEILELISGLDYMGNIPTVPDLEKPIEIQVSTTRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKGTISRFQAQYNIQEINPYLQDILQNPEDLVSLSQHHKR
Ga0169717_100040	Ga0169717_100040107	F101357	MNLNNITTALKTGITIYQYEQWQNTGSVNLMQKESHMLSKVWLKTNIHNPDSLDKPFIQLSATFTSESDIQEYNEWLDANQYKLYPLLLDILKISLKSDFHNYSNTSNIHYEGGKFPSMLTIQLFNLEF
Ga0169717_100040	Ga0169717_100040112	F064817	MNIKNLFNRFRKRESELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMRLFGMYSDKPYVLIYQEYKSRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAAKALVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDTDMLFFNHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI
Ga0169717_100040	Ga0169717_10004093	F032312	MARIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGSEQVLKPKNYYHFDSHGNYKGSSMNFDAMVCLGFTWFKLLGVALMMLLWPIVFIYALNDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS
Ga0169717_100040	Ga0169717_10004094	F060985	MSNIDEEAKNNFTIEMRIFENYEKVKHEIIKVIDFLRHAETNLGMCNIFNSQDHEFWHSVIKPWFQPERFGITHLWFSSGFSFIGYGEYHTIRGNRWLKTPIDKIDRENRIFGYWFPYYKKYIPHRIKILKLALKDLERIKEEYGKD
Ga0169717_100040	Ga0169717_10004096	F080163	MKTIKFLQESFETKERFQQEINIKYFYNRNTVESIDFRINQRNIRYFYEAMQNFENSLVNEFKEKKNNFCDAKQFLESINDFDKILFVIINYMKTYFDFCKDYSKISLHVHLVQFDFTTSVLIQGFYNYTHRDLSFSTKLESQVLDSENELLQEKLDLIREEICELIGIDPNLEKQGHEDNYVFNLNIESDNQIGFFLQATEL
Ga0169717_100509	Ga0169717_10050914	F090514	MNLRIHALKKASRQRPGVKIAAARFFSILYYPFCAKRSSFFQQNVQPRGNFFANRPIFVYFADVLPRLTGANWFVILLTIVPAGSRTRAGSSLPLIPASNIFLKQTPRRGLPLAWNAGAVPFLFCG
Ga0169717_101240	Ga0169717_10124010	F056682	MKMQSRAGKVANQSVGQSEMYPASFWAFPSKNRSTFPIQELRKNREDQEVL
Ga0169717_104259	Ga0169717_1042597	F051936	GTGQVLFFPLALRGKAFGFSVLQEHAVMTPVISIFFVVLIIRHLSIHISIKK
Ga0169717_112692	Ga0169717_1126921	F088920	LFVKWNPKNHYFIFLFPAFFSFVSANLHHYPAFWAGVILHLILHFSQKVAIFAPKRVILLLFVPTLFFAGLSVFSPQTSSKISGQTSLHQPWLSPYYLFKD
Ga0169717_115384	Ga0169717_1153843	F099406	MAEVDYNSKFEGQEVDSRLENVVQAAPGTGSESGKGGLIPAPPAGSQDGSKTLLSNMTWGDHVTKQYIDDAVSAAGWKKQIVSKLPTVEEAKDNVMYLVKDDVASTETKNVYNEYILVTEDGGTKVLESLGMVSTGVDSGYLDLSIFSGNSGSLDENSFAKVLDAYNNNITLGKLDGDYYYLNYFLEGNDFENNFKLKIVFASFANTDSAVGASEYDIEIQVGTFVVIQDKTYEAMNNLVTLSNTILSYLNFMAMPPKV
Ga0169717_121811	Ga0169717_1218111	F074964	MITKKNVNKLQNAVIKENASNLVGAVKLYNALFANGADLKAICKTLEIPAEYAVKVAALAKDKKRLVAVCSQMLPKVGDTFVKFSLYSKVYKDNKVDKEKGIEAKTADWCAENVIYGGEYKPFGFSTAETLETKKSAKWLVKETDEYKATYVAVKIKSYSIRTIAKCVSEYLTHESNQQ
Ga0169717_127188	Ga0169717_1271881	F032286	RCRTLVFDARLFVGNAADDTLVTGGTFRFCRLMCLCVKRRNVKPDSKHRSLPDSALFHADNRTEQKTISPFSLALIFTFDFAALSERRSCPEDRSRRFVLLGALDAALRQRTYPVRTVMQFSRFRCDCKTILAKNIALSRISKRSENAPKNADFHAYGQDRKRAEI
Ga0169717_158773	Ga0169717_1587731	F090513	MAKYVRKMEWKLLHIKHILYMQPFGALKIASQSVGNKNGTKAVLQGLAAAFVP

Scaffold ID

Protein ID

Family

Sequence

Ga0169717_100040

Ga0169717_100040100

F044555

MKTTNPSSRITISQNGNQILTCKVYKEPNYILSMSNEEILELISGLDYMGNIPTVPDLEKPIEIQVSTTRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKGTISRFQAQYNIQEINPYLQDILQNPEDLVSLSQHHKR

Ga0169717_100040

Ga0169717_100040107

F101357

MNLNNITTALKTGITIYQYEQWQNTGSVNLMQKESHMLSKVWLKTNIHNPDSLDKPFIQLSATFTSESDIQEYNEWLDANQYKLYPLLLDILKISLKSDFHNYSNTSNIHYEGGKFPSMLTIQLFNLEF

Ga0169717_100040

Ga0169717_100040112

F064817

MNIKNLFNRFRKRESELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMRLFGMYSDKPYVLIYQEYKSRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAAKALVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVGLEEILELMQHNWLKEFELLVFKRNYDTDMLFFNHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETI

Ga0169717_100040

Ga0169717_10004093

F032312

MARIKDYDEDLSAPKLLRERARDSKGRFIKKDLPPYLGSEQVLKPKNYYHFDSHGNYKGSSMNFDAMVCLGFTWFKLLGVALMMLLWPIVFIYALNDGIEGYPFKKYAIPYIFILVAWFIIFLYGLVS

Ga0169717_100040

Ga0169717_10004094

F060985

MSNIDEEAKNNFTIEMRIFENYEKVKHEIIKVIDFLRHAETNLGMCNIFNSQDHEFWHSVIKPWFQPERFGITHLWFSSGFSFIGYGEYHTIRGNRWLKTPIDKIDRENRIFGYWFPYYKKYIPHRIKILKLALKDLERIKEEYGKD

Ga0169717_100040

Ga0169717_10004096

F080163

MKTIKFLQESFETKERFQQEINIKYFYNRNTVESIDFRINQRNIRYFYEAMQNFENSLVNEFKEKKNNFCDAKQFLESINDFDKILFVIINYMKTYFDFCKDYSKISLHVHLVQFDFTTSVLIQGFYNYTHRDLSFSTKLESQVLDSENELLQEKLDLIREEICELIGIDPNLEKQGHEDNYVFNLNIESDNQIGFFLQATEL

Ga0169717_100509

Ga0169717_10050914

F090514

MNLRIHALKKASRQRPGVKIAAARFFSILYYPFCAKRSSFFQQNVQPRGNFFANRPIFVYFADVLPRLTGANWFVILLTIVPAGSRTRAGSSLPLIPASNIFLKQTPRRGLPLAWNAGAVPFLFCG

Ga0169717_101240

Ga0169717_10124010

F056682

MKMQSRAGKVANQSVGQSEMYPASFWAFPSKNRSTFPIQELRKNREDQEVL

Ga0169717_104259

Ga0169717_1042597

F051936

GTGQVLFFPLALRGKAFGFSVLQEHAVMTPVISIFFVVLIIRHLSIHISIKK

Ga0169717_112692

Ga0169717_1126921

F088920

LFVKWNPKNHYFIFLFPAFFSFVSANLHHYPAFWAGVILHLILHFSQKVAIFAPKRVILLLFVPTLFFAGLSVFSPQTSSKISGQTSLHQPWLSPYYLFKD

Ga0169717_115384

Ga0169717_1153843

F099406

MAEVDYNSKFEGQEVDSRLENVVQAAPGTGSESGKGGLIPAPPAGSQDGSKTLLSNMTWGDHVTKQYIDDAVSAAGWKKQIVSKLPTVEEAKDNVMYLVKDDVASTETKNVYNEYILVTEDGGTKVLESLGMVSTGVDSGYLDLSIFSGNSGSLDENSFAKVLDAYNNNITLGKLDGDYYYLNYFLEGNDFENNFKLKIVFASFANTDSAVGASEYDIEIQVGTFVVIQDKTYEAMNNLVTLSNTILSYLNFMAMPPKV

Ga0169717_121811

Ga0169717_1218111

F074964

MITKKNVNKLQNAVIKENASNLVGAVKLYNALFANGADLKAICKTLEIPAEYAVKVAALAKDKKRLVAVCSQMLPKVGDTFVKFSLYSKVYKDNKVDKEKGIEAKTADWCAENVIYGGEYKPFGFSTAETLETKKSAKWLVKETDEYKATYVAVKIKSYSIRTIAKCVSEYLTHESNQQ

Ga0169717_127188

Ga0169717_1271881

F032286

RCRTLVFDARLFVGNAADDTLVTGGTFRFCRLMCLCVKRRNVKPDSKHRSLPDSALFHADNRTEQKTISPFSLALIFTFDFAALSERRSCPEDRSRRFVLLGALDAALRQRTYPVRTVMQFSRFRCDCKTILAKNIALSRISKRSENAPKNADFHAYGQDRKRAEI

Ga0169717_158773

Ga0169717_1587731

F090513

MAKYVRKMEWKLLHIKHILYMQPFGALKIASQSVGNKNGTKAVLQGLAAAFVP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029033: Human fecal microbial communities from mother in Denmark - 504_M

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences