3300021974: Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_FS929 _150kmer

Overview

Basic Information

• IMG/M Taxon OID: 3300021974
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0129105 | Gp0216780 | Ga0232645
• Sample Name: Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_FS929 _150kmer
• Sequencing Status: Permanent Draft
• Sequencing Center: Marine Biological Laboratory
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 472881746
• Sequencing Scaffolds: 9
• Novel Protein Genes: 9
• Associated Families: 8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium ADurb.Bin331	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Characterization Of Microbial Community From Mariana Back Arc
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids → Characterization Of Microbial Community From Mariana Back Arc

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Perseverance vent field, Mariana back arc basin
• Coordinates
  • Lat. (^o): 15.47990499
  • Long. (^o): 144.50763029
  • Alt. (m): N/A
  • Depth (m): 3912

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002883	Metagenome / Metatranscriptome	523	Y
F013484	Metagenome / Metatranscriptome	271	Y
F026445	Metagenome / Metatranscriptome	198	Y
F030941	Metagenome	184	Y
F036294	Metagenome / Metatranscriptome	170	Y
F052414	Metagenome	142	Y
F077283	Metagenome / Metatranscriptome	117	Y
F079636	Metagenome	115	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0232645_1001543	Not Available	5316
Ga0232645_1003969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	3781
Ga0232645_1008373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2821
Ga0232645_1010268	Not Available	2585
Ga0232645_1022307	All Organisms → cellular organisms → Bacteria	1834
Ga0232645_1047262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1279
Ga0232645_1164242	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	703
Ga0232645_1172847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dependentiae → unclassified Candidatus Dependentiae → Candidatus Dependentiae bacterium ADurb.Bin331	687
Ga0232645_1305850	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	532

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0232645_1001543	Ga0232645_10015437	F030941	MLTFLLTALIVFMSVPAAFGLLVFFHVFVRKKTSPADASNRINHFRLVWFALTREEKFVDVFPWMKNDEMENIENKSETRNQP
Ga0232645_1003969	Ga0232645_10039692	F036294	VAVMDKGFADEAVVGVKLLADDDAVTYQRIKLTENDREVGAEGWNM
Ga0232645_1008373	Ga0232645_10083732	F036294	VTVTDKGFSDEAIVGVKLVADEDAVTYLRIKLSASDKEVGAKGWNM
Ga0232645_1010268	Ga0232645_10102682	F013484	MNVSLDLSECTLSTEHQAIVDALNKLLSWLPDDKNPEAALRLALLVLEAADVAPQAVLARAVGLSQDRSVRVYKQRLRQEGLSGLFDHPIPGRPAITTRTAVERSLLQVILEAVIQEHTLPSDAQLAERVNQRLRQAQEPEAEQVTASMVETIRLRWGIQRPVMAQQFQAAPPTPPEEERVRLGRTQVGGAFILAVLLVETGWLKAAQLLPMAAGYAVTATQWLLTALFAVIFGVRRAFHLDDVRDIGFALVTGRARPLSHGTFQHLLHAIPADKAQAFYAETARREVQALGEGDRRVSVDGHNLPRYTHLVDLVKGKIGNTGRILKAEELVLAYDLDAHRWLALRVYQGTKELSKGVVEIVQELRRHRGDRRGLLSIFMDKGGYSGLVFRPLDAEERVLFYIPAVRYPANVEQWEQLQDADFDAEPFTYDKHADLPADQRPAYRLADIEMEVNVREGRKVVGTVTLRAIVLHNPHGEKPAERWPVVLLTNDRKSDARTLLNEYGDHWGQEFAHRIGRHDLCLDILPPGYVLTTRRDEQGRIVRKVEYDDTAFFLSAWLRSLVFNLMTDFAQTLGGKYARMWAGTLLRKFIRRPATLYLVDKELHVVFDPFPGQDELQPLLERLNAQRTALPWLNGLVVQFH
Ga0232645_1022307	Ga0232645_10223071	F079636	DHPNVTAADGTVSSLGETQILGFDLSENDSLVMPIRSEYRAIDDPTILRSQKQGFFGWAELGFACLDSRMLGMGVIDRSL
Ga0232645_1047262	Ga0232645_10472621	F026445	ERQIEYYDGRQESVEIIRVRCLECKKVFTVQPSFVVRYKRQETDAIEKLMTLLFITEDSYRMAGVSQALGMDTRQEGTWVALEEKQATAIQPLALWGLVQWMGQLSPAQLNLALGVDPPEYIIEDEKHVKEEGEKAYVPMIYAAEEALIWWVDYLYSASEDELKASFERFKALSDRLGQIVGATVDGWEAAQNALRETFSGITLEECHFHALLSLSKHLATYKRKQKAEGAPISEEQEKIIRNAFIRVLTAPTSESYQQALDELPDAFEDPPLASRKQSLIEKQSLFQAWVEDSRLVVVTTALDQCMKFLNRKFENMQTFRGPKSGLATVNAWAITRNCWRFLKGAKRAGLSPLELAGANFLGIPWMQIVNLVLSAWPTVPLVASVLYPST
Ga0232645_1164242	Ga0232645_11642422	F052414	KTEARIETIRHKMDEIPAMLDGALLTKRNRVSRKDGSVYISPEYYTFQYRGSDGKRRWKRIPKKALASVKKLVRAAKRYRELEREYTALVTEISVAGRKKGGD
Ga0232645_1172847	Ga0232645_11728471	F077283	MSNAEQVAHEKMLRDCENSMFGGDVHDVETPVHVWIDAKRESPIVAQMVWVAVPNVVTCRYQVILCYMDSDEQWRDAGGVLMFRRVSFWQYADVPECEVLC
Ga0232645_1305850	Ga0232645_13058502	F002883	NLIFMSTLHHEDLLLTIFEEVQENFPYLDEEKQIEIANNRFQELCQ