3300021539: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st32ic 200bp no Eukaryotes last

Overview

Basic Information

• IMG/M Taxon OID: 3300021539
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117787 | Gp0124816 | Ga0224716
• Sample Name: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st32ic 200bp no Eukaryotes last
• Sequencing Status: Finished
• Sequencing Center: University of New South Wales
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 54822198
• Sequencing Scaffolds: 48
• Novel Protein Genes: 54
• Associated Families: 48

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	6
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1
Not Available	32
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Bacteria	3
All Organisms → Viruses → Predicted Viral	2
All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Upa-Upasina 'control' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.828217
  • Long. (^o): 150.820517
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000479	Metagenome / Metatranscriptome	1092	Y
F001407	Metagenome / Metatranscriptome	702	Y
F001905	Metagenome	619	Y
F003751	Metagenome / Metatranscriptome	470	Y
F004325	Metagenome / Metatranscriptome	443	Y
F006793	Metagenome	364	Y
F008031	Metagenome / Metatranscriptome	340	Y
F008560	Metagenome	331	Y
F008942	Metagenome / Metatranscriptome	325	Y
F013419	Metagenome	271	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0224716_1000104	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1276
Ga0224716_1000563	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	678
Ga0224716_1003156	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	643
Ga0224716_1005387	Not Available	521
Ga0224716_1009175	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	728
Ga0224716_1011376	Not Available	561
Ga0224716_1012704	Not Available	829
Ga0224716_1018262	Not Available	779
Ga0224716_1018789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	716
Ga0224716_1022806	Not Available	1155

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0224716_1000104	Ga0224716_10001043	F035329	MATRKSLVLISGLTQELNSSSDKLDFAGNSTSDLSEG
Ga0224716_1000563	Ga0224716_10005632	F008560	MLKYFKVEDLIDSFHTDEKNKGRRYREFLYHCYTKFEKEIKKIKSKKIINRYITMRNNTLSHLIQNEKEITLKLSK
Ga0224716_1003156	Ga0224716_10031561	F003751	DEGVFGWPGVEAFELIGFAKVTNLVGTKASHKSFDLTVPSPDRRPDDRVRDDRTSLVVQASTDRPAYIYGASVAIAQDLPAGGLATFPASPVTADLGGTTGELLLLGPNNGGVPFGVPSTQQNGLAAASSSIQASSSLFAQGLTDTTTGDLPFWTVVTGGGITAANAANSMMYKVTADTTFKVFNVDAIANTTVSGDGVFISQADSDAGRAAYI
Ga0224716_1005387	Ga0224716_10053871	F023046	PFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSTYLLSMAEITPGSSFEPSKPREQKLGY
Ga0224716_1009175	Ga0224716_10091751	F022150	LVGTGRAISILFGINGVRNQRSHLVGAPFPEFKARFSATAGWHFSSDLTRCLLIGGCGHSHVSVKYG
Ga0224716_1011376	Ga0224716_10113762	F090258	MKKFNKMESNLICDSLDYYVAHLEAEIKALEEKGRTSIFAPGFYPMIKDELVNKIKQDMTKKQRVXHYT
Ga0224716_1012704	Ga0224716_10127042	F001905	MMFPFYIRMAILLCVGAFAPIIIHHIIMKLWDVSILRAAEYTFIACIPIAVWMAEKINERWNDEDK
Ga0224716_1018262	Ga0224716_10182621	F059684	SHLEVAVEGRKLAYTVHFTSYKAVPRSRRQSRDMK
Ga0224716_1018789	Ga0224716_10187891	F008031	MATYKSDAGAILEPGNQINRLSSFNHEGVKGWPGVEAFEQIGFVKINNASADKASFKSFDITVPSPDRRVSDRVRDDRTTLVVKASSARPAYVYGASIALAQDDPSGGLPSFPASPITADLGGTNTEVLLLGPNNSGSPFGVPSTQQNGLAAASSSLTFSGTTISQGTGAVTTAKLPFWTVVTGGGITAANAANSMMYKVTADTTFK
Ga0224716_1022806	Ga0224716_10228062	F098759	HILTPILRLCLSLPTLVRQGYSAFFVSILSGESNELISMMKAWGYSSEKASGMISIKLV
Ga0224716_1027396	Ga0224716_10273963	F031451	MTKRILKEGDRVRYSSTFCRTIGAVTGFTPQARGVITRLWGKGEFAEIVWDFPDPEGKLCGGAHVSALERLK
Ga0224716_1037722	Ga0224716_10377221	F006793	MRRWILPNAHTTNTRGIMTNNRSTNEQIQERVNFAADELAKGKRAMDISKKLASKYNVSIQQARDYVRQAKPILTQSISPNDRAFIFSKVMSCLEQDRLDARKEENLKDQTKSTAGMVKMVSLLTSIDQVGSWDSAREAEGDYLFRNFSEVARKRKKYGDLDSLDNTTDSETPF
Ga0224716_1039600	Ga0224716_10396001	F059684	MGGHLEVAVEGRKLAYTVHFTLYKAVARSRRQSRC
Ga0224716_1041277	Ga0224716_10412771	F008031	MATYKSNAGAILQPGNQINKLSSYNKEGVHGWPGLEFYEQIGFVKVSNKSGTKANFKSFDITIPSPDRRPDDRVRDDRTSLVVPASSTKPAYVYQASLAIAQDIPAGGLPTFPASPVPADLQGTNGEFLLLGPDNGGAPLGVPANQPSGLAAASSLLDIGASGIAQGTGMTSTDGTVDGIIPFWTVVTTGGI
Ga0224716_1041476	Ga0224716_10414761	F098759	PILRPCLSLPTLVPQGYSALFVSILSGESKELITMMKARGYSDEKASGMISIKLV
Ga0224716_1043265	Ga0224716_10432652	F032680	MSKYVGRIMDEVYDNFRNHFDDNEEKVWFLEELIEQLQTELEYYSNE
Ga0224716_1044181	Ga0224716_10441812	F004325	MKHKKASTTEKADKFLQNIGTAGGAIGSPQLVGFGGMDTMSQVAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK
Ga0224716_1044368	Ga0224716_10443682	F087060	MYTIITTKPMTQSHTTSNDTSAKQVVRTLSCITQGKPVDTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENDRVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG
Ga0224716_1045175	Ga0224716_10451751	F069743	MQSHTINLSIAPSDYDALTGFLMGPFSDSVRQLSFNVSIVNDAIPEDDEDFTARLTLLPADQARLRNRVTVQPD
Ga0224716_1045486	Ga0224716_10454862	F092220	MEPVKTIEPITEKDEIQKFQELKEQVFKEYADYSLNKLYNFNELLIDTIHQLQFKQMAMQELITHRLDNICPKETNSN
Ga0224716_1046540	Ga0224716_10465406	F024330	MSQNDKLPAGTENYPVNNYIPKSNPNSRPKKFTKYAYVIKNQVEWDRMHKRYVVLEGKGKQETQPIPLLHKDNRKAYEDACDVCKWHYKNREARTLYVTDGTYISPTAIKRMRELP
Ga0224716_1046762	Ga0224716_10467621	F067817	MLRPNTELLREDVMQGQPRFVDISKGTLTAETKRSRAVNKATKY
Ga0224716_1047800	Ga0224716_10478001	F013419	MRESKYSFLYRNSDGHVMRPESFLNINKGRTLSSSQLRMLGIEKIKNPSYKRQAASIKRQAAST
Ga0224716_1049136	Ga0224716_10491362	F058430	VKDTLNFTSTTFDVDVPSQSAANGNANVSLPVDFCFYLVSTGTITNINQFFPLFTQSIPQVSENQILSTTLTEKLPLINHPTVQSGALNFAGANNETAPKQRGLMLRRGQALYVAASGATALTNGFYCNIQGGFY
Ga0224716_1049808	Ga0224716_10498081	F100481	MYNHYPGSRGVTDIVSVTMPLLSIKDLAVAISTRAGPAEDDPPLYKLGLKPVQAVCKGESGALN
Ga0224716_1050551	Ga0224716_10505512	F013419	MIRESKYSFLYRAHDGSIMKPENFLNINKGRTLSSSQLRMLGITKIKNPSYKRQASSRKLDKQPE
Ga0224716_1053857	Ga0224716_10538572	F047978	TLLLFSLDATAGEVTEFKPRPAAVEQGSDTYVGILLSEEDFRKLLQDKIDTNAKVAECDVDKKVCTKLQEQYKLSIKNLQETIQKDNTWFKRNKGSLGLLTGVVIGVGTSIAIVRAVQPS
Ga0224716_1053913	Ga0224716_10539134	F090511	MLSPFKSKILQRLGLNHVAYHGNKNCNEDWLNGYFQAKKDLEMQLNQIMITTDDLD
Ga0224716_1054330	Ga0224716_10543301	F015565	MLLFCAKTIVTESRNFELARLKKKKKENILAVRMATFWFGTFAMLFSATGCVVRHENTRK
Ga0224716_1060301	Ga0224716_10603011	F044550	MYVMGRKLVRARKLYYLIIDDESKYCLLKLDTESKDYIELDHDLDLFALSRLLFQQDHDHNNKRIQSKKE
Ga0224716_1061005	Ga0224716_10610052	F001407	MSIIKQDQRRLDNIANMYWKTSGEMREMWGRKWYELIKIIGRKLDESKNERSAADTRQIH
Ga0224716_1061958	Ga0224716_10619582	F043451	MPNIQPWLYPQHPSPDRVAYTPTRSAHILEYQEEMIDAEGNVYWMTVDSTTLGGATSVKEFLEQMKDFYETKSCRKDKMQS
Ga0224716_1061958	Ga0224716_10619585	F077401	MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYKKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKE
Ga0224716_1062973	Ga0224716_10629732	F101300	FPNTGIESVIPGTRQDREGNVIDSRDNPGVFNDFGYAPTGNFYQVPEYNDDPEGSLSGLLYYQTRWCKHIYAALWSMKHDEGNDQFSFEGRYQQSGPNVTITIVNHGLLPDKRVAIDFTSGDLLDGQYVVSSVPDENTIVIVYPFSGTTQGDCTVSNLKIHEYVNTWLLEPNDQPAGNALEKFYKNFEKEQERTRKAAERMALLGYGLPWTGNKDVEFGQRNAPEEVAQFDPTLVTMKLTDTIRRDGRELSRDGRLLNNAASTLMSMQKVLNLDFKLIEDVRIGLVNQPLTDFTPDFQFGEIEGGVYLNGVPETGAGVSSMDCSTYNPGVEQSINVDAGLYLN
Ga0224716_1062974	Ga0224716_10629742	F069320	MSIKLPDSPVSRISRCFKCHHLAVEFWNPKYNRSYTVEEWLTICEEGRDS
Ga0224716_1063258	Ga0224716_10632582	F080158	MATYKSSAGAILQPGNQINKLSGYNDEGVFGWPGIEAFELIGFAKVTNLEADKASNKSFDLTVPSPDRRPDDRVRDDRTTLVVQASSDRPAYIYGASVAVAQDLPAGGLATFPASP
Ga0224716_1063489	Ga0224716_10634891	F015565	MLLFCAKTIVKESRKFELAHLKKKKKEKHFGRLVTFWFGTFAMLFSTPGCVFRHENTRR
Ga0224716_1064044	Ga0224716_10640442	F018810	MVNPQKPIVKLGTKLEKGVVTGIFHGKIEVTGEAGVQSLTFATVEKEVL
Ga0224716_1065258	Ga0224716_10652581	F068499	RYSLLVSEMYSIREFSAFYSNLQVTSGQMASLPGHFRSPKVT
Ga0224716_1067544	Ga0224716_10675442	F027869	MDTKKAKKAKNMAENALRMMALEEQMEAAQEADLQPEDGYINPMGRIGTVPPTTYSLGNMLNGTTTQSVINPET
Ga0224716_1068834	Ga0224716_10688341	F093358	VSYKLMNLKIILLLIHCLVDMPTSQARLSYLVMSERYRIVRVMVSEDR
Ga0224716_1069039	Ga0224716_10690391	F000479	MSKAVNILEVLEKAHQSPDKISERNKKAIVDAYGRALTMKKVLDDFIKVNRNLITDMGMILHGKDYTIHVSEKLSVKVDSNLVKEKLGEVEYHKCKVPTQYKTIQALPNE
Ga0224716_1069561	Ga0224716_10695614	F037769	MSYIQTQTDKEDEKLLRRLLSEKMPEKDADKIISHVFSNLIKWTYEDAVLHLTQVFNFTEEESNQLIKEYDILSSTTKEVIMNPPPNFNATAPNDVKDYSANLWQARKCLSDAKKLINATALTPKDYENDEDFHEALLHRLHIAEHFISINKYIDEHLDFAKAHIPPQAP
Ga0224716_1069561	Ga0224716_10695617	F006793	MTNNRSNNQQMEERVNYAADQLAKGKRAMDISKKLASKYSVSIQQARDYVRQAKPVLTQSISPNDRAFIFSKVMSCLEQDRLDARDQENLKEQTRSTGGMVKMVSLLTSIDQVGSWDSAKESEGDYLFRNFSEVARKKKKYGDLDSLDNSDMPF
Ga0224716_1074628	Ga0224716_10746281	F025263	MAINANQLHVAKIYPGNYTNALRYWHEEKSVSFQNANGVDSTYPNHPVGGPVAVLFQPGSIAQQAVGYVDLSYQALGTNNQLSYYTKPYGSGQNSAEQPFLNGDVIVPSPDFHKDVRADITDGIKVPATAYVYRASLRLSGGDIVSSGVAGADSTPELTLVPAVGVGLKDDGTVVSGQFGASITGANSAIANGSTGSTNIFDSSSWAALGSETQWKLFTTTDLGGAAGSGLAQGSGVYDPRAAANKLSGDDKALAICEVCW
Ga0224716_1078868	Ga0224716_10788683	F051941	MATSFKNMIYDLTPTTSEKTVYGVPTDSHSIINAFYVNNTDPFSSIFVEVRLDRGPNRLYVASTTSLFSVELASNQYLNLLTGPLVLEGGDKLVFTTNTTGRVQGTIAAMQVNREDQETTPIGSV
Ga0224716_1079505	Ga0224716_10795051	F106146	PGNIQSVIQTVGFNIESILNELSKNSGGSGAVGTNATSKGEMFFNRDQLEFDDYDRQETTITLTDLPQGNNPFASTTKNVPVSMNDLFSEDWFVSQGYDTSYAENKVRENFIIYGLARANKPTGRLNVDDIKRASDAISIYGAKAPQDVITALKEVDRKIRQAQQGLLRAYPEIILRDPTFSNPEKTDKILRNLGLNPDDFATYLNQLTQSGTSPDANAI
Ga0224716_1088193	Ga0224716_10881932	F017657	MMMDNNRKEALDKATKAKQKMAIEAEMMKQIQPTVPEVTAENIDMQPAIIPNPKPEGPVVGANVFNPGNLYPGISGTSKLAANWNPMMDPAAG
Ga0224716_1088193	Ga0224716_10881933	F082820	MRKLIDGLAIASFVLSLTTVGAIGFGYLALTNKTNQEKIKNYAIGQVQKLLSDQLTKSIPSLPDATGDVVPVKPSLPKF
Ga0224716_1090804	Ga0224716_10908041	F013777	MTKTFTMWGPTSTAHFKNLHDHYLKKNHVVHAYATPYHNDPADNPAAMWSFVMHEKRDLERIAFKTYIHPQGDFQNGYYDICDIEKGTFDSDNMNLGEVYPVILYAHHETILTVGCVVKTSDHPDIHGKEQLALWIYYPSAENIESFDMASGHIYE
Ga0224716_1095168	Ga0224716_10951681	F043240	MWSIEAQKKPWNKTGGMTPLMVSTASAEALKSSESETMPPIIAWLHNVT
Ga0224716_1095930	Ga0224716_10959303	F008942	RRGLFEGVKEKAMSKKEKGRKWDGKSRVSNDLYRKNFEIIFGKKIDKDKEELEGYYIHDGKIDVLTKKKS
Ga0224716_1096977	Ga0224716_10969771	F024258	MRLHVNYACAIGTRLNLDLLCVAQNGVVLELHRIAASQNCQSCQFANKRAERGYYDESDIVLCVKLLNTCFSL
Ga0224716_1098246	Ga0224716_10982462	F034580	MLALKNKQLTSSGQVTTKVSAGTNTLSAPARVVALNIKCGATQGKVDLIDNGSGGTVKYTIVTPAIGSGEDEYLQVNFPDTGLRFETDLFVFFNQATSVGVVYG