Basic Information | |
---|---|
IMG/M Taxon OID | 3300018564 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117946 | Gp0217158 | Ga0193513 |
Sample Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_142 - TARA_N000003083 (ERX1789499-ERR1719165) |
Sequencing Status | Permanent Draft |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Published? | N |
Use Policy | Open |
Dataset Contents | |
---|---|
Total Genome Size | 12259094 |
Sequencing Scaffolds | 12 |
Novel Protein Genes | 15 |
Associated Families | 15 |
Dataset Phylogeny | |
---|---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata | 4 |
Not Available | 5 |
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi | 1 |
All Organisms → cellular organisms → Eukaryota → Sar | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Oxyrrhinales → Oxyrrhinaceae → Oxyrrhis → Oxyrrhis marina | 1 |
Ecosystem Assignment (GOLD) | |
---|---|
Name | Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Alternative Ecosystem Assignments | |
---|---|
Environment Ontology (ENVO) | marine biome → marine water body → sea water |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
---|---|---|---|---|---|---|---|---|
Location | Gulf of Mexico: TARA_142 | |||||||
Coordinates | Lat. (o) | 25.5264 | Long. (o) | -88.394 | Alt. (m) | N/A | Depth (m) | 5 |
Location on Map | ||||||||
| ||||||||
Zoom: | Powered by OpenStreetMap © |
⦗Top⦘ |