Sample 3300015240

Overview

Basic Information
IMG/M Taxon OID	3300015240 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128895 \| Gp0209315 \| Ga0182876
Sample Name	Freshwater microbial mat microbial communities from Canadian High Arctic Lake 9K, Kuujjuarapik, Canada - Sample L9Kc
Sequencing Status	Permanent Draft
Sequencing Center	Laval University
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	1268020347
Sequencing Scaffolds	14
Novel Protein Genes	14
Associated Families	13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
Not Available	4
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Mat Communities From High Arctic Lakes
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lake → Unclassified → Microbial Mat → Microbial Mat Communities From High Arctic Lakes

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → freshwater lake → microbial mat material
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline)

Location Information
Location	Kuujjuarapik
Coordinates	Lat. (^o)	55.275009	Long. (^o)	-77.758484	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F008255	Metagenome / Metatranscriptome	336	Y
F014394	Metagenome / Metatranscriptome	263	Y
F025524	Metagenome / Metatranscriptome	201	Y
F034114	Metagenome / Metatranscriptome	175	Y
F037780	Metagenome / Metatranscriptome	167	Y
F039244	Metagenome	164	Y
F040701	Metagenome	161	Y
F043249	Metagenome / Metatranscriptome	156	Y
F043793	Metagenome / Metatranscriptome	155	Y
F070266	Metagenome	123	Y

Scaffold	Taxonomy	Length	IMG/M Link
Ga0182876_10000655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2481	Open in IMG/M
Ga0182876_10001663	Not Available	1920	Open in IMG/M
Ga0182876_10004476	Not Available	1422	Open in IMG/M
Ga0182876_10006209	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
Ga0182876_10011301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1044	Open in IMG/M
Ga0182876_10030702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	730	Open in IMG/M
Ga0182876_10035573	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
Ga0182876_10039081	Not Available	660	Open in IMG/M
Ga0182876_10039756	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
Ga0182876_10042426	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	638	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0182876_10000655

All Organisms → cellular organisms → Bacteria → Proteobacteria

2481

Open in IMG/M

Ga0182876_10001663

Not Available

1920

Open in IMG/M

Ga0182876_10004476

Not Available

1422

Open in IMG/M

Ga0182876_10006209

All Organisms → cellular organisms → Bacteria

1275

Open in IMG/M

Ga0182876_10011301

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium

1044

Open in IMG/M

Ga0182876_10030702

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium

730

Open in IMG/M

Ga0182876_10035573

All Organisms → cellular organisms → Bacteria

688

Open in IMG/M

Ga0182876_10039081

Not Available

660

Open in IMG/M

Ga0182876_10039756

All Organisms → cellular organisms → Bacteria

655

Open in IMG/M

Ga0182876_10042426

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

638

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0182876_10000655	Ga0182876_100006553	F043793	MLVPDRLTVIVTVNICDAAATALQINGSEGSLMIEWE*
Ga0182876_10001663	Ga0182876_100016635	F034114	PVIMRETSVAAGAVNENLLAGSAFEFARTNSLVSIGLNQSATGGFATINSGADVVAEEFAPPIAGVYPVIPDGMYFSDVAAAGDRLVIRYRNPTGGALVVRVVCQVTAL*
Ga0182876_10004476	Ga0182876_100044762	F034114	MPVIMREQSVAAGAVNENILSGSAFEFARQNSLVSIGVHQAATGGFATINSGADVIAEEFSPPIATVYPIIPDNMYFSDVAAAGDRLVIRYRNPTGAAIIVRVVCQVTAL*
Ga0182876_10006209	Ga0182876_100062091	F037780	AKRWSAWVRASGRPEGGNDDGTTPTQKSDLFVGAMTPVKAG*
Ga0182876_10011301	Ga0182876_100113011	F070266	ELASGPVVATMCHPYTWKSFQRGVRRALGGNPKRSPRLTRRELAEEAARAGLRLERVIPVMPLLSEVWVVVLRALPRTS*
Ga0182876_10030702	Ga0182876_100307021	F043249	MPKIVGTRERIHQPFYDSLIRIDGSGDLRQANVGVFGAVQSRSQLFTRQGSDIASSNLSTGGFFPSDQTFVILAVRVWTYFRFNTESSRSTAGADPALFPPINANAPSPVSVGPGVTADRISRVHKLYHQTQNQLFWQFQAGDKPQFTTYTAYTPFAGGLDGFFSDSRLPRANNGVPTSSALMRLARPILIPPRQGFVVIAIASPIGQAQ
Ga0182876_10035573	Ga0182876_100355732	F095853	VILWVLWRRGLLRRFDREKVGFFLGHGADRLDLSRRYPLWRRLGLWHMIRAPA
Ga0182876_10039081	Ga0182876_100390811	F008255	AAMLRRSSPSRQEPLMINQMQEFVAEQAAALGSQVEKIRKGSMETVREVAVDSASSLKSLKSPVRTLARSGIKVTAVSQTAVASLIELQSDMLTSAISAAALRLERASRAENIVELVREQFEMIPATRDRLVEDAQRAALIFKHAGRDLRGVATNLYERVVETAEENIPEVTVTKRKVKRAVRKTKPAVRKTGTRARKTAAAA*
Ga0182876_10039756	Ga0182876_100397561	F039244	MPQQVPAFQFSDDAKRVRQVIYEHWCAHGRAPAMATG
Ga0182876_10042426	Ga0182876_100424262	F080041	VTPTENTSEFNFDIYCFDIIQKDRANIITILSDTQQILNDLYVYYMTSNDYSFDVVGMPTFSALNNDLLDYAAGYVMNITLTVNDWTDCAVPL*
Ga0182876_10042981	Ga0182876_100429812	F025524	MISFQIPEQLATATRSYLLAFGHPVPDEIVERYATRAGPLLLEIRQAIALQRPVK
Ga0182876_10052907	Ga0182876_100529072	F040701	VADSYFDPVASVWSRGAGIALLLAAAGLTTALGYALFEIVVQDESRRTFTSSSLVSGLILLALCGICWQAGFRLAFNRPDRNGSLFSRPAWFAIGSGLIVVTVLMAWAIVSARSPTGLDYWVVITLAALGVWCIILALRPGRRQTP*
Ga0182876_10054740	Ga0182876_100547401	F093898	KRRCHWREFSMMRFLISRAVNPPISLFDGLKTWNRIAHALREPPRKRTYQADRMDDFLC*
Ga0182876_10069789	Ga0182876_100697891	F014394	SITERRRGEIPGGGKMRVGTRFLAVLLAAAVWIYAGLSVASRPVAQQAITPSVLDVAASCAQAVVD*

Scaffold ID

Protein ID

Family

Sequence

Ga0182876_10000655

Ga0182876_100006553

F043793

MLVPDRLTVIVTVNICDAAATALQINGSEGSLMIEWE*

Ga0182876_10001663

Ga0182876_100016635

F034114

PVIMRETSVAAGAVNENLLAGSAFEFARTNSLVSIGLNQSATGGFATINSGADVVAEEFAPPIAGVYPVIPDGMYFSDVAAAGDRLVIRYRNPTGGALVVRVVCQVTAL*

Ga0182876_10004476

Ga0182876_100044762

F034114

MPVIMREQSVAAGAVNENILSGSAFEFARQNSLVSIGVHQAATGGFATINSGADVIAEEFSPPIATVYPIIPDNMYFSDVAAAGDRLVIRYRNPTGAAIIVRVVCQVTAL*

Ga0182876_10006209

Ga0182876_100062091

F037780

AKRWSAWVRASGRPEGGNDDGTTPTQKSDLFVGAMTPVKAG*

Ga0182876_10011301

Ga0182876_100113011

F070266

ELASGPVVATMCHPYTWKSFQRGVRRALGGNPKRSPRLTRRELAEEAARAGLRLERVIPVMPLLSEVWVVVLRALPRTS*

Ga0182876_10030702

Ga0182876_100307021

F043249

MPKIVGTRERIHQPFYDSLIRIDGSGDLRQANVGVFGAVQSRSQLFTRQGSDIASSNLSTGGFFPSDQTFVILAVRVWTYFRFNTESSRSTAGADPALFPPINANAPSPVSVGPGVTADRISRVHKLYHQTQNQLFWQFQAGDKPQFTTYTAYTPFAGGLDGFFSDSRLPRANNGVPTSSALMRLARPILIPPRQGFVVIAIASPIGQAQ

Ga0182876_10035573

Ga0182876_100355732

F095853

VILWVLWRRGLLRRFDREKVGFFLGHGADRLDLSRRYPLWRRLGLWHMIRAPA

Ga0182876_10039081

Ga0182876_100390811

F008255

AAMLRRSSPSRQEPLMINQMQEFVAEQAAALGSQVEKIRKGSMETVREVAVDSASSLKSLKSPVRTLARSGIKVTAVSQTAVASLIELQSDMLTSAISAAALRLERASRAENIVELVREQFEMIPATRDRLVEDAQRAALIFKHAGRDLRGVATNLYERVVETAEENIPEVTVTKRKVKRAVRKTKPAVRKTGTRARKTAAAA*

Ga0182876_10039756

Ga0182876_100397561

F039244

MPQQVPAFQFSDDAKRVRQVIYEHWCAHGRAPAMATG

Ga0182876_10042426

Ga0182876_100424262

F080041

VTPTENTSEFNFDIYCFDIIQKDRANIITILSDTQQILNDLYVYYMTSNDYSFDVVGMPTFSALNNDLLDYAAGYVMNITLTVNDWTDCAVPL*

Ga0182876_10042981

Ga0182876_100429812

F025524

MISFQIPEQLATATRSYLLAFGHPVPDEIVERYATRAGPLLLEIRQAIALQRPVK

Ga0182876_10052907

Ga0182876_100529072

F040701

VADSYFDPVASVWSRGAGIALLLAAAGLTTALGYALFEIVVQDESRRTFTSSSLVSGLILLALCGICWQAGFRLAFNRPDRNGSLFSRPAWFAIGSGLIVVTVLMAWAIVSARSPTGLDYWVVITLAALGVWCIILALRPGRRQTP*

Ga0182876_10054740

Ga0182876_100547401

F093898

KRRCHWREFSMMRFLISRAVNPPISLFDGLKTWNRIAHALREPPRKRTYQADRMDDFLC*

Ga0182876_10069789

Ga0182876_100697891

F014394

SITERRRGEIPGGGKMRVGTRFLAVLLAAAVWIYAGLSVASRPVAQQAITPSVLDVAASCAQAVVD*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300015240: Freshwater microbial mat microbial communities from Canadian High Arctic Lake 9K, Kuujjuarapik, Canada - Sample L9Kc

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences