3300014830: Activated sludge bacterial and viral communities from EBPR bioreactors in Brisbane, Australia - M92511

Overview

Basic Information

• IMG/M Taxon OID: 3300014830
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118585 | Gp0137248 | Ga0119906
• Sample Name: Activated sludge bacterial and viral communities from EBPR bioreactors in Brisbane, Australia - M92511
• Sequencing Status: Permanent Draft
• Sequencing Center: California Institute of Technology
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 467432116
• Sequencing Scaffolds: 8
• Novel Protein Genes: 9
• Associated Families: 9

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	1
Not Available	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge → Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Australia: Thorneside Wastwater Treatment Plant
• Coordinates
  • Lat. (^o): -27.485973
  • Long. (^o): 153.190699
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001564	Metagenome / Metatranscriptome	670	Y
F011811	Metagenome / Metatranscriptome	287	Y
F013721	Metagenome / Metatranscriptome	269	Y
F018968	Metagenome / Metatranscriptome	232	Y
F025775	Metagenome	200	Y
F042359	Metagenome / Metatranscriptome	158	Y
F048325	Metagenome / Metatranscriptome	148	Y
F087385	Metagenome	110	Y
F104545	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0119906_1056633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1169
Ga0119906_1066015	All Organisms → cellular organisms → Bacteria	1071
Ga0119906_1113446	All Organisms → cellular organisms → Bacteria	787
Ga0119906_1145724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus thioparus	680
Ga0119906_1160768	Not Available	642
Ga0119906_1180735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599
Ga0119906_1208751	Not Available	551
Ga0119906_1209976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	549

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0119906_1056633	Ga0119906_10566331	F013721	MAVSKVGQGTLPKWWRDASGLSGGGVVEVRPLRDGLNSIVLTPRPAKRRGAVGLLAQFARCPKPIEPPERHPLPFK*
Ga0119906_1066015	Ga0119906_10660152	F018968	MTVIEISDKQAAALRAKAAAHGLSLTAWLEKLADEEAAAPRKPLETGRGMWAKYGPAPSAEEIDENRREMFRNFAKD*
Ga0119906_1088513	Ga0119906_10885133	F087385	LSAKSGGVLLSQGVYPQVPSALAVLTSVFGMGTGVTLPL*
Ga0119906_1113446	Ga0119906_11134462	F001564	LCTQSLCPDAPDDGGRCDHCPLDRLDSAQSSEPGLLIRRALDLRAALKLGIHLTLDDIRADEFHAMLILEDEREKLDREQLNPNGR*
Ga0119906_1145724	Ga0119906_11457241	F025775	KFTNFFGARTMKQLLTFQGFPMVVVTGLIVWAWISIFSVLIGSFF*
Ga0119906_1160768	Ga0119906_11607681	F048325	TWARQTGRIAVRQIVMEEQKTTQEWNLESAELAYSVIARYVEHTQISGILIAVMASALGEERVQPIVESGHWQSFMASKRELADAKADIESLTALIEKMRGETR*
Ga0119906_1180735	Ga0119906_11807351	F042359	ADGNDTLLILNRIGGNLGIGAASLGSLFGIFYDDAENALSFSVTGGCQFRSVLNNNFPRITPRFETFVPAGRTGWMRIYNQTGAIGMTGSAINFNANAASSAGAFNQGHNLHHLTLNNQMSYIIPVFPPSC*
Ga0119906_1208751	Ga0119906_12087512	F011811	MRTMLSTEQINDLHRLYWSERWPIRKIERHLRMGWHTIRKYLDAPAQGPVQRPRTS
Ga0119906_1209976	Ga0119906_12099761	F104545	AKHAQKRIDRQQAGNDCDAATRAVRAPTASGQPEVEPVGTILGSVGRHKTCRDVPAERDRTRRGLELAPMPRPFQHAGVKAAAQTSDRG*