NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300010231

3300010231: Soil microbial communities from Bangor area, North Wales, UK enriched with cashew seed oil ? week5, replicate 1



Overview

Basic Information
IMG/M Taxon OID3300010231 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0121424 | Gp0154110 | Ga0136216
Sample NameSoil microbial communities from Bangor area, North Wales, UK enriched with cashew seed oil ? week5, replicate 1
Sequencing StatusPermanent Draft
Sequencing CenterFidelity Systems Inc
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size187358437
Sequencing Scaffolds4
Novel Protein Genes4
Associated Families4

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Hanamia → Hanamia caeni1
Not Available3

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSoil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil
TypeEngineered
TaxonomyEngineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil → Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Soil (non-saline)

Location Information
LocationBangor area, North Wales, UK
CoordinatesLat. (o)53.24Long. (o)-4.01Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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