3300009964: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 5

Overview

Basic Information

• IMG/M Taxon OID: 3300009964
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151211 | Ga0133739
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 5
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 8329695
• Sequencing Scaffolds: 14
• Novel Protein Genes: 21
• Associated Families: 16

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7
Not Available	2
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → unclassified Candidatus Nanosynbacter → Candidatus Nanosynbacter sp. TM7-057	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella tobetsuensis	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018385	Metagenome	235	Y
F027205	Metagenome	195	N
F036281	Metagenome	170	N
F043991	Metagenome	155	N
F049707	Metagenome	146	N
F051214	Metagenome	144	N
F054110	Metagenome	140	N
F071329	Metagenome	122	N
F074985	Metagenome	119	N
F081456	Metagenome	114	N
F084342	Metagenome	112	N
F095632	Metagenome	105	N
F103430	Metagenome	101	N
F103434	Metagenome	101	N
F105376	Metagenome	100	N
F105377	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133739_10018	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	37381
Ga0133739_10020	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	36374
Ga0133739_10026	Not Available	32888
Ga0133739_10027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	30118
Ga0133739_10030	All Organisms → Viruses	26704
Ga0133739_10040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → unclassified Candidatus Nanosynbacter → Candidatus Nanosynbacter sp. TM7-057	20539
Ga0133739_10051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella tobetsuensis	17485
Ga0133739_10081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10746
Ga0133739_10082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10717
Ga0133739_10187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	3874
Ga0133739_10295	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2545
Ga0133739_10350	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2233
Ga0133739_13604	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae	619
Ga0133739_13956	Not Available	589

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133739_10018	Ga0133739_1001845	F049707	VVSEYRSPHNDGHDPYILIWEYGSEVQQAEFTERWAEYEPDTGWTVWYFRLEDGRIMTFRALEWEQKDDVNHLTTIYFTPKKGEQ*
Ga0133739_10020	Ga0133739_1002023	F095632	MTMSFKETTGYKVVSLVASTSASITAGAVVGALCPPAGVVLTAVYGIGSSVLGTYVGDKAGRQYAETVAETIDSMKTPQNN*
Ga0133739_10020	Ga0133739_1002043	F049707	VVSEYKSPHNDGHDPYILIWEYGTDINKAEFSERGVIVDENGRVIWYFRLDDGRVMIFPSTNWDQKDDVNHLTTVWMQPKTPKEGD*
Ga0133739_10026	Ga0133739_100269	F105376	MDKNNEQPEVSAKEFGALQANVEHIKEGVDKHTITLERIENIARANVTQSQLKTYIAEHEKEAEEKYVKRTEVEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTQVRRK*
Ga0133739_10027	Ga0133739_1002718	F103434	VVEVTIAVVKEGRTGRRFERGETFTIDKVLVQPSAGNALKATENRVIRGDLTDETTLKVFGTGRKWPGGPHSWVKIIKGPDSLVGKTFQQAGEPLTYDASPMTRHWSVRCDTLGTESR*
Ga0133739_10030	Ga0133739_1003021	F105377	VRDFDKLPLLTPEEAFERAREMGWNRPLFDHGYRVRGLNDWRAIETLLRQYDVEDAVIASFGLKRFEEIFDAFALLHERGWHLWQTSAKVYVGGELRTVPAIRAHYRGY*
Ga0133739_10040	Ga0133739_100402	F105376	MNEKPEVSAKEFGALQAKVEYIKDGVDKHTVMLERIENIARDNVTQSQLKTYIAEHEKESEEKYVKRTEIEGVMNFWKLVTSNLAKLFAIALVGLAIYATSNLIQQNKAVTELQEEVQQTVRRK*
Ga0133739_10051	Ga0133739_100512	F054110	VFDVNYQPTIKKLLKALQMNGRRYVVDVRQSWSKYDKPCKVYIVNRMYTEEEYKLTFPHKYKKGKTFKQGQLYKKESEYSSTKQHEVLLFLVRTYKGGE*
Ga0133739_10081	Ga0133739_1008111	F043991	MSKKNPSVIDYFDLNGDLNEEAYEFEDVKLEEYIDKRSNVKPSWVGKYSHQMHFDLPDDTEVSFYKGLNIVYADINFPNGIRTILFKCRQKKNLTRFISRVLEIAQGDPSNVHPDFRA*
Ga0133739_10081	Ga0133739_1008112	F051214	MPGKIIANDTHLRIDTEFIELKDCFEAFRRGVEYREKCDVDDILVICNAPDIIEYQLKNGDSFIVTYDPIHRIIVMRVFLHDEDITIKPIYIYNNREYQIACEFLRQIMHDKIDLKDEWIA*
Ga0133739_10081	Ga0133739_1008114	F018385	MKETTMDEFENKWDPYLEQSIEKDRDPVKDDHIIYGVNVQHFTVTVYSQDGRVNKYWNARILKDDLGYCRIACPRDGKILCFNWVHWTAYMFTHDGLNELVFMPGSSRKTISRLFHEEVK
Ga0133739_10081	Ga0133739_100816	F074985	MMELTDGGWYKTPRIIKGEDFLAHIHDTYASGNAMYVEFKASEGEVRILEYRRLYEVDTESAVLFTINTYPQESILLKNIEEYEFIQYRPQQAWKAIHMGSTKRFNLEQFDQLWLDQTFKKLHPVIVNHDGKFWHVMGLKLDVDADGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDPTQEIKDLEEIKHTLRADAILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAIKLRIVTDSETGEQKYLLDHIKAMHID*
Ga0133739_10081	Ga0133739_100817	F036281	MITLIKVDEGPVDIYELRMQYLAKLKETDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNAEGLITKMRIKNGDLISNGSVLFLAEERKTYNAKEYYDYWTAREGKPAPFFYESRQYHVKSFMRVPGSTDLWITAEREKGHWYTFRLSDDQKSKFTRHTMTNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133739_10081	Ga0133739_100818	F027205	VASRLIVSADDILKAVKESEEFEKKALSEARKRDRAEGKEPRETLYPNPDLKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFIVDVSQVRNRELADEIEQDLFAFMDYLLDEYDIPRRIKRSTK*
Ga0133739_10082	Ga0133739_1008213	F071329	MRPLYSKGILMLPVAKIIISGLSSIGAGMIASRLTKPIVSNSNGIAKILLWFGSVGTGIAASAIVAREVEKQFDETVAAVKEASTHVEIED*
Ga0133739_10082	Ga0133739_100828	F027205	MRAVKESEEFERKALVEARKRDRAEGKPPREVLHPDHKPGRAIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFVVDVSQVRNRDLADEIEKDLFAFMDYLLDEYDIPRRIRK*
Ga0133739_10187	Ga0133739_101874	F103430	MIEQITIKAFIGSNNKTKQLEVDKIISTVNANHEAFTLDYPVIGYWRSEAEETAVLYLSDERQKVMNTLNELKEVLDQEAIAYQIENDLQLI*
Ga0133739_10295	Ga0133739_102954	F081456	LGYRLFLEKGAHMFEEPPIYYILISLIFLIVFGAVAFATWLVWLTSISFMAKLVMTAIGFLLCAMTVILYTISAD*
Ga0133739_10350	Ga0133739_103504	F081456	LGYRLFLEKGAHMFEEPPIYYILISLIFLIVFGAISFATWLVWLTNVAFFVKMVITAIGFLFAAFTVILYTISAE*
Ga0133739_13604	Ga0133739_136041	F084342	VSGQCGAKLFLLGGYLTIPIRCPFFAQALKETLGQERGLGDAYDKDYQNEKALQWIHRRHILGICKEE*
Ga0133739_13956	Ga0133739_139561	F054110	YCVVLNVNYQPTIKKLLKALQMNGRRYVVDVRQSWSKYDKPCKVYIVNRMYTEEEYKLTFPHKYKKGKTFKQGQLYKKESEYSSTKQHEVLLFLVKTYKGGD*