3300009961: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 14

Overview

Basic Information

• IMG/M Taxon OID: 3300009961
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120337 | Gp0151218 | Ga0133745
• Sample Name: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 14
• Sequencing Status: Permanent Draft
• Sequencing Center: Autonomous University of Barcelona
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 6852121
• Sequencing Scaffolds: 7
• Novel Protein Genes: 8
• Associated Families: 8

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2
Not Available	2
All Organisms → Viruses → Predicted Viral	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal secretion

Location Information

• Location: Alicante,Spain
• Coordinates
  • Lat. (^o): 38.3852246
  • Long. (^o): -0.5132249
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F027205	Metagenome	195	N
F036281	Metagenome	170	N
F067846	Metagenome	125	Y
F073671	Metagenome	120	N
F074985	Metagenome	119	N
F084362	Metagenome	112	N
F103430	Metagenome	101	N
F105376	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0133745_10037	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15591
Ga0133745_10040	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15453
Ga0133745_10124	Not Available	4510
Ga0133745_10165	All Organisms → Viruses → Predicted Viral	3567
Ga0133745_10267	All Organisms → Viruses → Predicted Viral	2635
Ga0133745_11155	All Organisms → Viruses → Predicted Viral	1232
Ga0133745_11920	Not Available	917

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133745_10037	Ga0133745_100378	F074985	MELTDGGWYKTPRIIKGTDFLAHIHDTYASGNAMYVEFKASEGEVRILEYKRLYEVDTESAVLFTINTYPQESILLKNIEEYEFIQYRPKQAWKAIHMGSTKRFNLEQFDQLWLDQTFQKLHPVIVNHDGKFWHVMGLKLDVDADGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDSTQEIKDLEEIKQTLRADAILDVTVSGVPMKLIRVQEIAKGVLFFVFQDEEKNKRYYYNRPAAKLRIVTDSETGEQKYLLDHIKAMHID*
Ga0133745_10037	Ga0133745_100379	F036281	MITLIKVDEGPVDIYELRMQYLAKLKQTDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNAEGLITKMRIKNGDLMSNGSVLFLAEERKTYNAKEYYDYWSAREGRPAPFFYESRQYHVKSFMRVPGSTDLWITAERETGHWYTFRMSDAQKSKFTRHTMTNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133745_10040	Ga0133745_100409	F027205	MRAVKESEEFEKKALSEARKRDRAEGKEPREVLHPDHKPGREIVLDYIKNPERRRTPRCSVHLEKRTANNSYRFIVDVSQVRNRELADEIEKDLFAFMDYLLDEYDIPRRIRK*
Ga0133745_10124	Ga0133745_101246	F103430	MIEQITIKAFIGSDNKTKKLEVDKIISIVNANHEAFTLDYPVIGYWRGEAEETAVLYLSDERQKVMNTLSELKEVLGQEAIAYQIENDLQLI*
Ga0133745_10165	Ga0133745_101655	F073671	MEKEQAKHELAELHEKERSLEKALELVREKIRELINYTDKNKEQK*
Ga0133745_10267	Ga0133745_102674	F067846	MESLQAQWERKTFNDWDKQCSKEDDYNRAVEMEIESIKEDISNCDSDTLCAFSEKMFDDDEFLKAVALGTNYEEMRIKILTAMAEDRLEQLEKDYKNGYILND*
Ga0133745_11155	Ga0133745_111551	F105376	YMNNTNKEVSAKEFGALEADVRHIKEGVDKHTITLERIENIAQANVTQAQLKTYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTVRRK*
Ga0133745_11920	Ga0133745_119202	F084362	WSDDKNKPHAKPYATEADAKRAKKWLLEHGVRSVDIAVKINNKPAGSLKDDKPSETDAEHKGFWWEK*