3300008686: Food microbial communities from the fermentation process of Kimchi from South Korea - J7

Overview

Basic Information

• IMG/M Taxon OID: 3300008686
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0118005 | Gp0126693 | Ga0104245
• Sample Name: Food microbial communities from the fermentation process of Kimchi from South Korea - J7
• Sequencing Status: Permanent Draft
• Sequencing Center: Chung-Ang Univiersity
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 28694776
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Ophiocordyceps → Ophiocordyceps sinensis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Food Microbial Communities From The Fermentation Process Of Kimchi From South Korea
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Freshwater → Sediment → Unclassified → Fermented Vegetables → Food Microbial Communities From The Fermentation Process Of Kimchi From South Korea

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant corpus

Location Information

• Location: South Korea
• Coordinates
  • Lat. (^o): N/A
  • Long. (^o): N/A
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013050	Metagenome / Metatranscriptome	275	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0104245_1002726	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Ophiocordycipitaceae → Ophiocordyceps → Ophiocordyceps sinensis	653

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0104245_1002726	Ga0104245_10027262	F013050	MSKGKQPRTRVKVPKLLLSENKEVFFKYNQEIGLEAAIF*