3300007323: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C2_LD (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007323
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123877 | Ga0099768
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C2_LD (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 136310516
• Sequencing Scaffolds: 14
• Novel Protein Genes: 14
• Associated Families: 12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	2
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
All Organisms → cellular organisms → Eukaryota	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004323	Metagenome / Metatranscriptome	443	Y
F008248	Metagenome / Metatranscriptome	336	Y
F014824	Metagenome / Metatranscriptome	259	Y
F014836	Metagenome / Metatranscriptome	259	Y
F014988	Metagenome / Metatranscriptome	258	Y
F017318	Metagenome / Metatranscriptome	241	Y
F018020	Metagenome / Metatranscriptome	237	Y
F019117	Metagenome / Metatranscriptome	231	Y
F030442	Metagenome / Metatranscriptome	185	Y
F051952	Metatranscriptome	143	N
F070166	Metatranscriptome	123	N
F091427	Metagenome / Metatranscriptome	107	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099768_1007281	Not Available	1240
Ga0099768_1056769	Not Available	727
Ga0099768_1113247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	561
Ga0099768_1129155	Not Available	896
Ga0099768_1184439	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum	736
Ga0099768_1217818	Not Available	667
Ga0099768_1250646	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	690
Ga0099768_1287329	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	792
Ga0099768_1305028	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	890
Ga0099768_1305686	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	602
Ga0099768_1312703	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	662
Ga0099768_1320067	Not Available	537
Ga0099768_1330052	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	677
Ga0099768_1331651	All Organisms → cellular organisms → Eukaryota	1451

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099768_1007281	Ga0099768_10072811	F070166	VSKIAYGKDFSLIELAALFHNQLWLQVKCETDIHFKEKFGGTLEVLAKILKECNFSRGLQPGTISRMKTKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEINKLPPKSFIGKGYRDHGTAPSPEIDGTPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVAERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP*
Ga0099768_1056769	Ga0099768_10567691	F070166	YGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTRWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELILKLLKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRMKF*
Ga0099768_1113247	Ga0099768_11132471	F004323	MPHNRLSPLEGRAAPTAATHSPVARDYPSRALSDVFQAAALRL
Ga0099768_1129155	Ga0099768_11291551	F051952	MPKFPRQTIAPDHFTTTALSENSWRILGKVTENEVTLVRYFLSKLVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLKDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099768_1184439	Ga0099768_11844392	F014988	MSFNPASPITGAAVPGFTNPTYTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIK
Ga0099768_1217818	Ga0099768_12178181	F019117	MSVLAKVVLVLAIVAAVSAQKNKPKFSDSFTSNVEFVEVFNGQNFSIYGSWYVDFVGRQHAFHANDQTFGPMQIYRYYNLSKQYEFYVNSGFCNEQMGMRLPFFGTFDFLAKASNTGNCADRHGNNGLMWTATINSQPGSGFELNLCASATANIPYFIDMRGQWNYQDFERQVQFLGYYPGTPDPSLFKLPQQCQ*
Ga0099768_1250646	Ga0099768_12506461	F030442	PAPWAFDQTKNTFNPTASMVAQITLLGGTAVSACTVELVSALEDHIPGFVSNWTNGGTYPMSRQDDDNSYAGVIGPKVSSKSIAVGTIEVSSALRRSEIEDIKANTGMDIVQKMESILVNELSQTISKQIIAKIFELGALNRTSAPTRGGSPLFDLDTSYVGTSGPGGETTHAVQRKLITKLVHASNFIATEGRVGPAQFAVTNGGLAAAFMDVAGYTINPAKSKINGS
Ga0099768_1287329	Ga0099768_12873291	F017318	ATKTLTKSQNKRAVSRRASQNKSPNTIKNPELNQVVKFVRTVEGAFDITTTGLVANYGVFNFSLNDLPNYTEFTALFDLYKLEAIEIEWIPEYTELTDAALVSNAVNVYFNSAIDPAGNTPASVDDVLQYRTLHSTSITKHHKRRFVPAYLADGIMPVSSYISCASPSTNLYGLVYGIPATGVAMTFRSRVRYFLSMAQAR*
Ga0099768_1305028	Ga0099768_13050281	F017318	SKCRGDPSGISFNQLWLSPRVGSHYLLTKSQNKRAVKRRASRNKSPLPNMGIPLQGAPLKFQRTVEDAFNIVCDGINPSVGTFNFSLNDLPNYTEFTALFDMYKIDKIEIEFYPEYTVLSDGGVTSPAIDVQLNTAVDPTGQSVTAVSDVLQYSTLVATGISKNHKRTFVPSYLMDGILPCACYISTASPSSNLWGLAFGVAPTGTAMTFRSRAKFFLSLALSR*
Ga0099768_1305686	Ga0099768_13056861	F014824	VTKNKKTTILTIKPLDQITIGVTDIIINSKSKIKKIIQKTKNRSDTGNTLTLKESNPHSNLSDLINLDLSKNLPTPITIGIIIEIIK
Ga0099768_1312703	Ga0099768_13127031	F008248	FKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGL
Ga0099768_1320067	Ga0099768_13200671	F014836	IVLVGYTFAQCPAVQGYCPQERIYQGCHCFHEWNDANRVGNWTFPENWLQLYEPAWVSFVSIAGDNTITVDTERRVNELYVGPNRWDTTRLVIDEDLTIVYDDVPVISNVRGYRLPTGVVRLVIQGKGFGFVSEDITVTAKEHYEIDGDSSEPEEFTYECESVTLTFRDAKIECNIRPT
Ga0099768_1330052	Ga0099768_13300522	F091427	DMLIIGVYYAGISTTISLTNLLVTRRTLTMPGMRNRRILLPFITITILLMFRALAVITPVLGSAMLMLALDRH*
Ga0099768_1331651	Ga0099768_13316513	F018020	VSETFGDGTIEKLSMILSGYSSLTFEINKVPIPDPVPPPNEWVI*