3300007225: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_B4L_H (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007225
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123871 | Ga0099776
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_B4L_H (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 114086174
• Sequencing Scaffolds: 9
• Novel Protein Genes: 10
• Associated Families: 10

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
Not Available	5
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002779	Metagenome / Metatranscriptome	530	Y
F014836	Metagenome / Metatranscriptome	259	Y
F025291	Metagenome / Metatranscriptome	202	N
F026273	Metagenome / Metatranscriptome	198	Y
F034947	Metagenome / Metatranscriptome	173	Y
F046210	Metagenome / Metatranscriptome	151	N
F056539	Metagenome / Metatranscriptome	137	Y
F065812	Metagenome / Metatranscriptome	127	Y
F081239	Metagenome / Metatranscriptome	114	Y
F091427	Metagenome / Metatranscriptome	107	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099776_1000257	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2006
Ga0099776_1028485	Not Available	691
Ga0099776_1086572	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	589
Ga0099776_1255994	Not Available	678
Ga0099776_1294164	Not Available	941
Ga0099776_1296750	Not Available	759
Ga0099776_1311422	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage	1228
Ga0099776_1315688	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1373
Ga0099776_1318655	Not Available	519

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099776_1000257	Ga0099776_10002572	F091427	MLILGVYYAGISTTISIVNLLATRRNLSIPGLRNRRILLPFISISILLMLRALVIITPVLGSAMLMLALDRH*
Ga0099776_1028485	Ga0099776_10284851	F081239	IPGAEAGFTGSKGTFARAGYAKQDTGDQERLETVPSRIK*
Ga0099776_1086572	Ga0099776_10865722	F065812	LLRLNIYRRPIAYKYCEGKMKRTLKRGLKDLKSLKRKQ*
Ga0099776_1255994	Ga0099776_12559941	F014836	NMRVFLLVALVAIFFGAVECSCPAVQGYCPQEKIYQGCYCFHEWNDANRVGNWTFPENWLQFYEPAWVSFVSIAGDNTVTVDVERRVNELYVGPNRWDTTRLVIDEDLTIVYDDVPAISAVRGYRLPNGVVRLVIQGKGFGFVSDDIQVAVHEEYEIDGDSNIEDREEFTYDCQHVTLTYRDAKIECNIAPTRPMPYTL*
Ga0099776_1286912	Ga0099776_12869121	F056539	VARMNCKVAIFLLALLSVVSCQLVLLNPPGRGFIGDNARHAPCGITPTSTGNTVAWEQGTVREIEVQILGAGGGGVIEDRYSCVLQGGESNPIEPIFPIEGALKVQVPDWDFQIYRLHVRLPSFVCRGDTTMQLIYSTEKGQEYFQCQDIVLTCSASSTLVASLVASI
Ga0099776_1294164	Ga0099776_12941643	F026273	ESEFSIKKLLNLKKILGDNNFNVLIFYNEFRKNQDIISDVFSNLTKFSNSQIVRDY*
Ga0099776_1296750	Ga0099776_12967501	F025291	QPNQRRKQVTNGKTKHHMVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKALTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099776_1311422	Ga0099776_13114221	F002779	PNKNMKNLKLELFNFKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYESALELVNEVRNELNYDLTFFYDNKLSKEIVAKKQLEDKERQITLKLEDVNFNISKLNGSVKVLGSTDVLTEALSNLEKRR
Ga0099776_1315688	Ga0099776_13156881	F046210	VVVAIIQMKNLKIEAEKGFRRTLFEPELVDPNLEINFVNDAEAALKSCNVNS*
Ga0099776_1318655	Ga0099776_13186551	F034947	LLLCISTGRKTLADSINRLKPPKEKRRKADKRSGRTGKYTQTRLVA*