3300007205: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_1 (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007205
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123886 | Ga0099763
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_1 (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 64925959
• Sequencing Scaffolds: 4
• Novel Protein Genes: 5
• Associated Families: 5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1
Not Available	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Austria: Klosterneuburg
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001758	Metagenome / Metatranscriptome	640	Y
F009934	Metagenome / Metatranscriptome	311	Y
F017318	Metagenome / Metatranscriptome	241	Y
F070166	Metatranscriptome	123	N
F090071	Metagenome / Metatranscriptome	108	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099763_1188083	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	606
Ga0099763_1210983	Not Available	988
Ga0099763_1220681	Not Available	887
Ga0099763_1222958	Not Available	514

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099763_1012771	Ga0099763_10127711	F001758	SGQAGWRDSSQAGAQVPGAEAEFTSSSGEVRASSVHAKKELGDEER*
Ga0099763_1188083	Ga0099763_11880831	F090071	NAADRALATRHAEAWYVATVLATGAASWALLTIARALTATTKETP*
Ga0099763_1210983	Ga0099763_12109831	F017318	MGIPLLVVSLKFERTVEGLFDISCDGINPSVGLFNFSLSDLPNNSDFTNLFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYKTCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNAIANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR*
Ga0099763_1220681	Ga0099763_12206811	F070166	LVSKIAYGKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEINKLPPKSFIGKGYRDHGTAPSPEIDGTPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVTERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP*
Ga0099763_1222958	Ga0099763_12229581	F009934	MREPLDGPVMRPETPLAVENGVGKLAAYTAPNVSMGK