Metagenome / Metatranscriptome Family F090071

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090071
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	50 residues
Representative Sequence	VTGVRRILNNAADRALATRHAEAWYVATVLATAAASWALLTIARALTATTKETP
Number of Associated Samples	35
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.67 %
% of genes near scaffold ends (potentially truncated)	25.93 %
% of genes from short scaffolds (< 2000 bps)	57.41 %
Associated GOLD sequencing projects	26
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.185 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent (27.778 % of family members)
Environment Ontology (ENVO)	Unclassified (74.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (82.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 87.04% β-sheet: 0.00% Coil/Unstructured: 12.96%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF07538	ChW	16.67
PF13229	Beta_helix	6.48
PF13472	Lipase_GDSL_2	6.48
PF01522	Polysacc_deac_1	2.78
PF12708	Pectate_lyase_3	1.85
PF03009	GDPD	1.85
PF01391	Collagen	0.93
PF13385	Laminin_G_3	0.93
PF05048	NosD	0.93
PF05658	YadA_head	0.93
PF01471	PG_binding_1	0.93
PF02839	CBM_5_12	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	2.78
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
All Organisms	root	All Organisms	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %
Viruses	superkingdom	All Organisms → Viruses	6.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.67 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13.89 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.85 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.89 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.85 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.93 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
unclassified Firmicutes sensu stricto	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	10.19 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.78 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.85 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.93 %
Firmicutes bacterium ADurb.Bin456	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin456	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	3.70 %
Tsukamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae	2.78 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	1.85 %
Arthrobacter phage Shoya	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Arthrobacter phage Shoya	1.85 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.93 %
Firmicutes bacterium ADurb.Bin456	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin456	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Tsukamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella	2.78 %
Xylanimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas	1.85 %
Arthrobacter phage Shoya	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Arthrobacter phage Shoya	1.85 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	0.93 %
Methylomonas paludis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	0.93 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.93 %
Gulosibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Gulosibacter	0.93 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Firmicutes bacterium ADurb.Bin456	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin456	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Tsukamurella tyrosinosolvens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella → Tsukamurella tyrosinosolvens	2.78 %
Xylanimonas oleitrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas oleitrophica	1.85 %
Arthrobacter phage Shoya	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Arthrobacter phage Shoya	1.85 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.93 %
Gulosibacter massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Gulosibacter → Gulosibacter massiliensis	0.93 %
Bacillus alveayuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus alveayuensis	0.93 %
Methylomonas paludis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	0.93 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Firmicutes bacterium ADurb.Bin456	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin456	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.63 %
Tsukamurella tyrosinosolvens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella → Tsukamurella tyrosinosolvens	2.78 %
Xylanimonas oleitrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas oleitrophica	1.85 %
Arthrobacter phage Shoya	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Arthrobacter phage Shoya	1.85 %
Nocardioides sp. 503	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. 503	0.93 %
Gulosibacter massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Gulosibacter → Gulosibacter massiliensis	0.93 %
Bacillus alveayuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus alveayuensis	0.93 %
Methylomonas paludis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	0.93 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Firmicutes bacterium ADurb.Bin456	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin456	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005656\|Ga0073902_10019372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	3393	Open in IMG/M
3300005656\|Ga0073902_10049185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Arthrobacter phage Shoya	2037	Open in IMG/M
3300005656\|Ga0073902_10157962	Not Available	1039	Open in IMG/M
3300005656\|Ga0073902_10437837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	566	Open in IMG/M
3300005659\|Ga0073900_10328279	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005659\|Ga0073900_10509707	Not Available	536	Open in IMG/M
3300005660\|Ga0073904_10741054	Not Available	526	Open in IMG/M
3300005664\|Ga0073685_1022423	All Organisms → Viruses → Predicted Viral	1869	Open in IMG/M
3300005664\|Ga0073685_1024086	All Organisms → Viruses → Predicted Viral	1794	Open in IMG/M
3300005664\|Ga0073685_1048716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. 503	1186	Open in IMG/M
3300005664\|Ga0073685_1076078	Not Available	911	Open in IMG/M
3300005664\|Ga0073685_1126930	Not Available	663	Open in IMG/M
3300005982\|Ga0075156_10108969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas oleitrophica	1542	Open in IMG/M
3300005986\|Ga0075152_10081772	Not Available	1893	Open in IMG/M
3300005986\|Ga0075152_10192704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1161	Open in IMG/M
3300005987\|Ga0075158_10316387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella → Tsukamurella tyrosinosolvens	883	Open in IMG/M
3300005987\|Ga0075158_10414102	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005987\|Ga0075158_10553636	Not Available	634	Open in IMG/M
3300006037\|Ga0075465_10006185	Not Available	2148	Open in IMG/M
3300006056\|Ga0075163_10245561	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2061	Open in IMG/M
3300006056\|Ga0075163_10250055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2039	Open in IMG/M
3300006056\|Ga0075163_10320831	Not Available	1755	Open in IMG/M
3300006056\|Ga0075163_10454248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1417	Open in IMG/M
3300006056\|Ga0075163_10609896	Not Available	1177	Open in IMG/M
3300006056\|Ga0075163_10702147	Not Available	1076	Open in IMG/M
3300006056\|Ga0075163_10921063	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300006056\|Ga0075163_10975617	Not Available	870	Open in IMG/M
3300006056\|Ga0075163_11138359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Gulosibacter → Gulosibacter massiliensis	786	Open in IMG/M
3300006056\|Ga0075163_11661043	Not Available	611	Open in IMG/M
3300006805\|Ga0075464_10036990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella → Tsukamurella tyrosinosolvens	2637	Open in IMG/M
3300006805\|Ga0075464_10069684	Not Available	1979	Open in IMG/M
3300006805\|Ga0075464_10073022	Not Available	1935	Open in IMG/M
3300006805\|Ga0075464_10814820	Not Available	581	Open in IMG/M
3300007205\|Ga0099763_1188083	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	606	Open in IMG/M
3300007232\|Ga0075183_11329839	Not Available	597	Open in IMG/M
3300007232\|Ga0075183_11489280	Not Available	506	Open in IMG/M
3300009071\|Ga0115566_10291435	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	965	Open in IMG/M
3300009435\|Ga0115546_1231403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	635	Open in IMG/M
3300009540\|Ga0073899_10052972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3209	Open in IMG/M
3300009540\|Ga0073899_10055809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin456	3118	Open in IMG/M
3300009540\|Ga0073899_10086457	Not Available	2443	Open in IMG/M
3300009540\|Ga0073899_10148002	Not Available	1804	Open in IMG/M
3300009540\|Ga0073899_10356127	Not Available	1089	Open in IMG/M
3300009540\|Ga0073899_10453720	Not Available	944	Open in IMG/M
3300009540\|Ga0073899_11075633	Not Available	563	Open in IMG/M
3300009540\|Ga0073899_11080191	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	562	Open in IMG/M
3300009674\|Ga0116173_1379868	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	614	Open in IMG/M
3300009688\|Ga0116176_10353685	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	721	Open in IMG/M
3300009688\|Ga0116176_10602195	Not Available	532	Open in IMG/M
3300009696\|Ga0116177_10523869	Not Available	617	Open in IMG/M
3300009696\|Ga0116177_10599852	Not Available	572	Open in IMG/M
3300009781\|Ga0116178_10618018	Not Available	524	Open in IMG/M
3300011009\|Ga0129318_10047633	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1091	Open in IMG/M
3300011281\|Ga0138295_130809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas oleitrophica	565	Open in IMG/M
3300012533\|Ga0138256_11269809	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300012533\|Ga0138256_11343307	Not Available	526	Open in IMG/M
3300012956\|Ga0154020_10170944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus alveayuensis	2036	Open in IMG/M
3300012956\|Ga0154020_10191336	All Organisms → Viruses → Predicted Viral	1896	Open in IMG/M
3300012956\|Ga0154020_10321378	Not Available	1358	Open in IMG/M
3300012956\|Ga0154020_10429358	Not Available	1124	Open in IMG/M
3300012956\|Ga0154020_10679032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	831	Open in IMG/M
3300012956\|Ga0154020_11245079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300025451\|Ga0208426_1003723	Not Available	2150	Open in IMG/M
3300025683\|Ga0208564_1192947	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	562	Open in IMG/M
3300025866\|Ga0208822_1090469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Tsukamurellaceae → Tsukamurella → Tsukamurella tyrosinosolvens	1198	Open in IMG/M
3300025877\|Ga0208460_10109308	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1133	Open in IMG/M
3300025896\|Ga0208916_10044887	All Organisms → Viruses → Predicted Viral	1805	Open in IMG/M
3300025896\|Ga0208916_10237404	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	792	Open in IMG/M
3300027705\|Ga0209063_1028395	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Arthrobacter phage Shoya	2136	Open in IMG/M
3300027724\|Ga0209582_1000656	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	19675	Open in IMG/M
3300027781\|Ga0209175_10048649	Not Available	1803	Open in IMG/M
3300027781\|Ga0209175_10133113	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300027789\|Ga0209174_10056662	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1879	Open in IMG/M
3300027794\|Ga0209480_10153684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1020	Open in IMG/M
3300027798\|Ga0209353_10229327	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	805	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	74.07%
Environmental	Environmental	25.93%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	74.07%
Aquatic	Environmental → Aquatic	25.93%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	31.48%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	27.78%
Marine	Environmental → Aquatic → Marine	17.59%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	14.81%
Freshwater	Environmental → Aquatic → Freshwater	8.33%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	31.48%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	27.78%
Coastal	Environmental → Aquatic → Marine → Coastal	15.74%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	14.81%
Lotic	Environmental → Aquatic → Freshwater → Lotic	7.41%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	31.48%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	27.78%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.74%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	14.81%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	7.41%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	27.78%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	19.44%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.81%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	14.81%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	9.26%
Aquatic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Aquatic	7.41%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	2.78%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005656	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB19-Kit	Engineered	Open in IMG/M
3300005659	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit	Engineered	Open in IMG/M
3300005660	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_precipitate	Engineered	Open in IMG/M
3300005664	Freshwater viral communities from Emiquon reservoir, Havana, Illinois, USA	Environmental	Open in IMG/M
3300005982	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown DNA	Engineered	Open in IMG/M
3300005986	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNA	Engineered	Open in IMG/M
3300005987	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B DNA	Engineered	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007205	Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300007232	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009540	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Ph	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009688	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaG	Engineered	Open in IMG/M
3300009696	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG	Engineered	Open in IMG/M
3300009781	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011281	Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_6R (Metagenome Metatranscriptome) (version 2)	Engineered	Open in IMG/M
3300012533	Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG	Engineered	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300025451	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025866	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025877	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027705	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB19-Kit (SPAdes)	Engineered	Open in IMG/M
3300027724	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit (SPAdes)	Engineered	Open in IMG/M
3300027781	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNA (SPAdes)	Engineered	Open in IMG/M
3300027789	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B DNA (SPAdes)	Engineered	Open in IMG/M
3300027794	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 DNA (SPAdes)	Engineered	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0073902_100193724	3300005656	Activated Sludge	MTGVRRILDNAADRALATRHAEAWYVATVLATAATSWALLTIARALTATT
Ga0073902_100491852	3300005656	Activated Sludge	MTSHPTGVRRILDNAADRAPATRHAEAWYVATVLATAATSWALLTIARALTATTKETP*
Ga0073902_101579621	3300005656	Activated Sludge	VTGVRRVLDNAVDRALATRHAEAWYIATVLATAAASWALLTIARALTAATKETP*
Ga0073902_104378372	3300005656	Activated Sludge	MTGARRILNNAADTALATHHAEAWYVATVLATAAASWALLTIARALTATTKETP*
Ga0073900_103282792	3300005659	Activated Sludge	MATGVRRILDNAADRSLATRHAEAWYVATVLATAATSWALLTIARALTAATKETP*
Ga0073900_105097072	3300005659	Activated Sludge	VIGVRRILNNAADTALATRHAEAWYVATVLATAATSWALLTIARALTATTKETP*
Ga0073900_105611501	3300005659	Activated Sludge	MTGVRRILDHAAARSLATRHAEAWYVATVLATAAAS
Ga0073904_107410542	3300005660	Activated Sludge	MATGVRRILDNAADRSLATRHAEAWYVATVLATAATSWALLTIARALTA
Ga0073685_10224232	3300005664	Aquatic	VAYGLARTHPTGVRRILDNAADSALATRHAEAWYIATVLATAAASWALLTIARALNTATKETP*
Ga0073685_10240862	3300005664	Aquatic	MSQRPTGVRRILNNAADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP*
Ga0073685_10275542	3300005664	Aquatic	MTGVRRILNNAADTALATRHAEAWYVATVLATGALSWALLTI
Ga0073685_10303271	3300005664	Aquatic	VTGVRRILDHAADRALATRHAEAWYVATVLATAAASWALLTIAR
Ga0073685_10435391	3300005664	Aquatic	VTGVRRILNNAADRAAATRHAEAWYVATVLATAAASWALLT
Ga0073685_10487161	3300005664	Aquatic	VTGVRRILNNAADTALATRHAEAWYVATVLATGALSWALLTIARALTATKETP*
Ga0073685_10760782	3300005664	Aquatic	MTPRRHRRRAPSTGVRRILNRAADRALAARHAEAWYVATVLATGALSWALLTIARALTAATKE
Ga0073685_11269301	3300005664	Aquatic	MTSHPTGVRRILNRAADRALATRHAEAWYVATVLATAATSWALLTIARALTAATKETP*
Ga0075156_101089692	3300005982	Wastewater Effluent	MNGVRRILNRAADRALATRHAEAWYVATVLATGAASWALLTIARALTAATKETP*
Ga0075152_100817721	3300005986	Wastewater Effluent	MTGVRRILDNAADRALATRHAEAWYVATVLATATASWALLTIARALTATK
Ga0075152_101285882	3300005986	Wastewater Effluent	MNGVRRILNRAADRALATRHAEAWYVATVLATAAASWAL
Ga0075152_101927042	3300005986	Wastewater Effluent	MATGVRRILNSTPARALATRHAEAWYVATVLATGAASWALLTIARALTAATKETP*
Ga0075158_101981741	3300005987	Wastewater Effluent	MATGVRRILNNAADRALAARHAEAWYVATVLATAAASWALLTIA
Ga0075158_103163871	3300005987	Wastewater Effluent	MSSHPSGVRRILDNAAARSLATRHAEAWYVATVLATAAASWALLTIARALT
Ga0075158_104141022	3300005987	Wastewater Effluent	MTGVRRILDNAADSALATRHAEAWYVATVLATATASWALLTIARALTATKETP*
Ga0075158_105536362	3300005987	Wastewater Effluent	MPTTGVRRVLNRAAARSLATRHAEAWYVATVLATGALSWALLTIARALTAATKETP*
Ga0075465_100061852	3300006037	Aqueous	MGHPTADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP*
Ga0075465_100083751	3300006037	Aqueous	VNGVRRVLNRAADSALATRHAEAWYVATVLATAAASWA
Ga0075163_102455613	3300006056	Wastewater Effluent	MTGVRRVLNHAADSALATRHAEAWYVATVLATAAASWALLTIARAL
Ga0075163_102500552	3300006056	Wastewater Effluent	VTGVRRILNHTADRSLATRHAEAWYVATVLATAAASWALLTIARALTTATKETP*
Ga0075163_103208312	3300006056	Wastewater Effluent	VTGVRRILDHAADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP*
Ga0075163_104542481	3300006056	Wastewater Effluent	MNGVRNALDNAADRALAAGPPTKAQEAWYVATVLATAATSWALLTIARALT
Ga0075163_106098962	3300006056	Wastewater Effluent	MTGVRRVLNNAADRALATRHAEAWYVATVLATAAASWALLTIARALTTATKETP*
Ga0075163_106830641	3300006056	Wastewater Effluent	MNGVRRVLNNAADRALATRHAEAWYVATVLATAATSW
Ga0075163_107021471	3300006056	Wastewater Effluent	MTGVRRILNRAADRALATRHAEAWYVATVLATAATSWALLTIARALTAATKETP*
Ga0075163_108997861	3300006056	Wastewater Effluent	MSSHPSGVRRILDNAAARSLATRHAEAWYVATVLATAAASWALLTIA
Ga0075163_109210631	3300006056	Wastewater Effluent	MTGVRRILDHAADRALATRHAEAWYVATVLATGALSWALLAIARALTATKETP*
Ga0075163_109756171	3300006056	Wastewater Effluent	VTGVRRILNRAADRALATRHAEAWYVATVLATAATSWALLTIARALT
Ga0075163_111383591	3300006056	Wastewater Effluent	VNGARRILDNAADRALATRHAEAWYVATVLATGAASWALLTIAR
Ga0075163_114568973	3300006056	Wastewater Effluent	MHGVRRILDNAAARSLATRHAEAWYVATVLATAATSWAL
Ga0075163_116610431	3300006056	Wastewater Effluent	MTPRLADVTGVRRVLNNAADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP*
Ga0075464_100343983	3300006805	Aqueous	MSEHPTGVRRILNNAADRALATRHAEAWYVATVLATAAASWALLT
Ga0075464_100369903	3300006805	Aqueous	MAHNRPTAMSSHPSGVRRILDRAADRALATRHAEAWYVATVLATAAASWALLTIARAL
Ga0075464_100479773	3300006805	Aqueous	MTGVRRILDNAADRALATRHAEAWYVATVLATAAASWALL
Ga0075464_100696841	3300006805	Aqueous	VTGVRRILNNAADTALATRHAEAWYVATVLATAAASWALLTIARALT
Ga0075464_100730221	3300006805	Aqueous	MTGDRRILNRAADRALATRHAEAWYVATVLATAAASWALLTIARALT
Ga0075464_103945433	3300006805	Aqueous	MHGVRRILNNAADRALATRHAEAWYVATVLATAAASWALLTI
Ga0075464_106889162	3300006805	Aqueous	MPTLVRRILNRAADSALATRHAEAWYVATVLATGALSWALL
Ga0075464_108148202	3300006805	Aqueous	MTGVRRILNNAAHRALATRHAEAWYVATVLATAAASWALLTIARALTATTKETP*
Ga0099763_11880831	3300007205	Activated Sludge	NAADRALATRHAEAWYVATVLATGAASWALLTIARALTATTKETP*
Ga0075183_113298391	3300007232	Wastewater Effluent	VHGVRRILNNAADRALATRHAEAWYVATVLATGALSWALLTIARALTA
Ga0075183_114018601	3300007232	Wastewater Effluent	MTGVRRILNRAADRALATRHAEAWYVATVLATAATSWALLTIAR
Ga0075183_114892802	3300007232	Wastewater Effluent	MATGVRRILNNAADRALAARHAEAWYVATVLATGALSWALLTIARALTAATKETP*
Ga0115566_102914352	3300009071	Pelagic Marine	VTGVRRVLNNAAGRALATRHAEAWYVATVLATAATSWALLTIARALTATTKETP*
Ga0115546_12314032	3300009435	Pelagic Marine	VTGVRRILNNAADTALATRHAEAWYVATVLATAATSWALLTIARALTATTKETP*
Ga0073899_100529725	3300009540	Activated Sludge	MNARPTGVRRILNNAADRALATRHAEAWYVATVLATAATSWALLTIARALTTATKETP*
Ga0073899_100558092	3300009540	Activated Sludge	MTGVRRILNNAADTAVFRPAYAEAWYVATVLATAAASWALLTIARALTTATKETP*
Ga0073899_100863184	3300009540	Activated Sludge	VTGARRILDNAAARSLATRHAEAWYVATVLATAAT
Ga0073899_100864571	3300009540	Activated Sludge	MTGVRRILNNAADIALATRHAEAWYVATVLATGALSWALLTIARALTATTKETP*
Ga0073899_101480022	3300009540	Activated Sludge	MPTTGVRRVLDRAADRALATRHAEAWYVATILATAAASWALLTIARALTATTKETP*
Ga0073899_103561272	3300009540	Activated Sludge	VTGVRRVLNHAADSALATRHAEAWYVATVLATGAASWALLTIARALTA
Ga0073899_104537202	3300009540	Activated Sludge	VTGVRRILNNAADRALATRHAEAWYVATVLATAAASWALLTIARALTATTKETP*
Ga0073899_110756332	3300009540	Activated Sludge	VTGVRRVLDNAVDRALATRHAEAWYIATVLATAAASWALLTIARALTAATKET
Ga0073899_110801912	3300009540	Activated Sludge	MTGVRRILDNAADRALATRHAEAWYVATILATATASWALLTIARALTAATKETP*
Ga0116173_13798682	3300009674	Anaerobic Digestor Sludge	VTGVRRILNNAADRALATRHAEAWYVATVLATAATSWALLTIARALTAATKETP*
Ga0116176_100787052	3300009688	Anaerobic Digestor Sludge	MTGVRRILDNAAARSLTTRHAEAWYVATVLATAAAPWALLTIA
Ga0116176_103536852	3300009688	Anaerobic Digestor Sludge	VTGVQRILDNAADRALATRHAEAWYVATVLATGALSWALLTIARALTATKETP*
Ga0116176_106021952	3300009688	Anaerobic Digestor Sludge	MTGVRRILNRAADRALATRHAEAWYVATVLATAAASWALLTIARALTTATKETP*
Ga0116177_101332121	3300009696	Anaerobic Digestor Sludge	VTGVRRVLNHAADRAAATRHAEAWYVATVLATAAASWALLTIA
Ga0116177_105238692	3300009696	Anaerobic Digestor Sludge	VTGVRRILDHAADRALATRHAEAWYVATVLATGAASWALLTIARALTAAT
Ga0116177_105790442	3300009696	Anaerobic Digestor Sludge	VTCLSGTADRALATRHAEAWYVATVLATAAASWALL
Ga0116177_105998521	3300009696	Anaerobic Digestor Sludge	MTGVRRILDRAAARSLATRHAEAWYVATVLATGALSWALLTIARA
Ga0116178_104161803	3300009781	Anaerobic Digestor Sludge	VHGVRRILNNAADRALATRHAEAWYVATVLATAAASWALLTIARA
Ga0116178_104425552	3300009781	Anaerobic Digestor Sludge	MATGVRRILDHAADRALATRHAEAWYVATVLATAAASWALLTI
Ga0116178_106180182	3300009781	Anaerobic Digestor Sludge	MTPRLADVTGVRRVLNNAADTALATRHAEAWYVATVLATAAASWALLTIAR
Ga0116249_107961172	3300010357	Anaerobic Digestor Sludge	MTLVRRVLNHAADRAAATRHAEAWYVATVLATGALSWALLTIA
Ga0129318_100476332	3300011009	Freshwater To Marine Saline Gradient	VTGVRRILGNAADRALATRHAEAWYVATVLATGALSWALLTIARALTATKETP*
Ga0138295_1308092	3300011281	Activated Sludge	VTGVRRILDNVVDRALATRHAEAWYVATILATAAASWALLTIARALTATTKETP*
Ga0138256_111249901	3300012533	Active Sludge	MTGVRRILDHAAARSLATRHAEAWYVATVLATAAASW
Ga0138256_112698092	3300012533	Active Sludge	MTGVRRILNNAAARSLATRHAEAWYVATVLATAATSWALLTIARALTATTKETP*
Ga0138256_113433072	3300012533	Active Sludge	MTSRMTGVRRILNNAADRALATRHAEAWYVATVLATAAASWALLTIARALTATTKETP*
Ga0154020_101709442	3300012956	Active Sludge	MTSRQTVAHRLTAGILDSAADRALATRHAEAWYVATVLATAATLWALLTIARALTAATKETP*
Ga0154020_101913364	3300012956	Active Sludge	MTGVRRVLDRAADRALATRHAEAWYVATILATAAASWALLTIARALTATTKETP*
Ga0154020_103074932	3300012956	Active Sludge	VRRILNRAADRSLATRHAEAWYVATILATAATSWALLTIARA
Ga0154020_103213782	3300012956	Active Sludge	VTGVRRILSNAAHRALATRHAEAWYVATILATAAASWALLTIARALTATTKETP*
Ga0154020_103721582	3300012956	Active Sludge	VTGVRRILDHAADRALATRHAEAWYVATVLATAAASWALL
Ga0154020_104293583	3300012956	Active Sludge	MATGVRRILNNAAARSLATRHAEAWYVATVLATAATSWALLTIARALTATTK
Ga0154020_104328571	3300012956	Active Sludge	VTGVRRILDNAADTALATRHAEAWYVATVLATAATSW
Ga0154020_106790321	3300012956	Active Sludge	VTGVRRALNHAADRALATRHAEAWYVATVLATGAASWALLTIARALTATTKETP*
Ga0154020_112450792	3300012956	Active Sludge	MNARPTGVRRILNNAADRALATRHAEAWYVATVLATAATSWALLTIARALTAATKETP*
Ga0154020_114070853	3300012956	Active Sludge	MTGVRRILNHAADRALATRHAEAWYVATVLATAAASWALLTIA
Ga0208426_10037232	3300025451	Aqueous	MGHPTADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP
Ga0208426_10697141	3300025451	Aqueous	VTGVRRILNNAAARSLATRHAEAWYVATVLATAAAS
Ga0208564_11929472	3300025683	Anaerobic Digestor Sludge	VMATGVRRILNNAADRALATRHAEAWYVATVLATTAASWALLTIARALTAATKETP
Ga0208822_10904693	3300025866	Anaerobic Digestor Sludge	MATGVRRILNNAADRALAARHAEAWYVATVLATGALSWALLTIARALTAATKETP
Ga0208460_101093081	3300025877	Anaerobic Digestor Sludge	MTGVRRILNRAADRALATRHAEAWYVATVLATAAASWALLTIARALTA
Ga0208460_101815781	3300025877	Anaerobic Digestor Sludge	VTCLSGTADRALATRHAEAWYVATVLATAAASWALLI
Ga0208916_100448873	3300025896	Aqueous	MPTLVRRILNRAADSALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP
Ga0208916_101498461	3300025896	Aqueous	VTGVRRILDNAADRALATRHAEAWYVATVLATAAASWALLT
Ga0208916_101678831	3300025896	Aqueous	MTGHPTGARRILNNAADRALATRHAEAWYVATVLATAAASWALLT
Ga0208916_102374042	3300025896	Aqueous	MATGVRRVLNRAADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP
Ga0209063_10283953	3300027705	Activated Sludge	MTSHPTGVRRILDNAADRAPATRHAEAWYVATVLATAATSWALLTIARALTAATKETP
Ga0209582_100065627	3300027724	Activated Sludge	MTSHPTGVRRILDNAADRAPATRHAEAWYVATVLATAATSWALLTIARALTATTKETP
Ga0209175_100486492	3300027781	Wastewater Effluent	MNGVRRVLNRAADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP
Ga0209175_101331132	3300027781	Wastewater Effluent	MNGVRRILNRAADRALATRHAEAWYVATVLATGAASWALLTIARALTAA
Ga0209174_100566622	3300027789	Wastewater Effluent	MNGVRRILNRAADRALATRHAEAWYVATVLATGAASWALLTIARALTAATKETP
Ga0209174_101302031	3300027789	Wastewater Effluent	MATGVRRILNNAADRALAARHAEAWYVATVLATAA
Ga0209480_100312051	3300027794	Wastewater Effluent	VTGVRRVLNHAADRAAATRHAEAWYVATVLATAATSWA
Ga0209480_101536842	3300027794	Wastewater Effluent	MATGVRRILNSTPARALATRHAEAWYVATVLATGAASWALLTIARALTAATKETP
Ga0209353_102293272	3300027798	Freshwater Lake	MAPNRPTAMSSHPTGVRRILNRAADRALATRHAEAWYVATVLATGALSWALLTIARALTAATKETP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090071

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences