3300007192: Ant gut microbial communities from Cephalotes persimplex, Brazil

Overview

Basic Information

• IMG/M Taxon OID: 3300007192
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117930 | Gp0126580 | Ga0103268
• Sample Name: Ant gut microbial communities from Cephalotes persimplex, Brazil
• Sequencing Status: Permanent Draft
• Sequencing Center: Harvard University
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 230860795
• Sequencing Scaffolds: 1
• Novel Protein Genes: 3
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Cephalotes Ants Gut Microbiomes
• Type: Host-Associated
• Taxonomy: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Ant Gut → Cephalotes Ants Gut Microbiomes

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut

Location Information

• Location: CICRA, Madre de Dios, Peru
• Coordinates
  • Lat. (^o): -12.5
  • Long. (^o): -70.1
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054614	Metagenome / Metatranscriptome	139	Y
F055821	Metagenome	138	Y
F060965	Metagenome / Metatranscriptome	132	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0103268_1073729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	853

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103268_1048886	Ga0103268_10488864	F055821	VVKIVAKLINCIKEEQRSVMRFLCTEDVPDAQIHFRMCAQYR*
Ga0103268_1072637	Ga0103268_10726372	F054614	MSLTFTLTGKSSILAVSYFPTVDLNDGDYELSLTDFETNYTIPNVNLSNNKFYFDKDDKEIVIPEGSYELHDIDK
Ga0103268_1073729	Ga0103268_10737293	F060965	MRYSLIDNVTLTLALLVTWLATNDTNNTLALDDFAVAANPLD*