3300007187: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C6L_LD (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007187
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123880 | Ga0099788
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C6L_LD (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 61924382
• Sequencing Scaffolds: 9
• Novel Protein Genes: 9
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	7
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Klosterneuburg, Austria
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F014988	Metagenome / Metatranscriptome	258	Y
F025291	Metagenome / Metatranscriptome	202	N
F037756	Metagenome / Metatranscriptome	167	Y
F051952	Metatranscriptome	143	N
F070166	Metatranscriptome	123	N
F091427	Metagenome / Metatranscriptome	107	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099788_1009690	Not Available	574
Ga0099788_1014552	Not Available	541
Ga0099788_1053899	Not Available	777
Ga0099788_1060739	Not Available	866
Ga0099788_1150402	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	557
Ga0099788_1202311	Not Available	629
Ga0099788_1204643	Not Available	614
Ga0099788_1205865	Not Available	621
Ga0099788_1209953	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum	1632

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099788_1009690	Ga0099788_10096901	F070166	ALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATIKRMKAKALTLEGDFLIPKRNMPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQLVGSEFGNLERESTELILKLMKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGK
Ga0099788_1014552	Ga0099788_10145521	F051952	LSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099788_1053899	Ga0099788_10538991	F051952	SWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLTRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFNTSRVQLFPQKKPGEKLHSSSN*
Ga0099788_1060739	Ga0099788_10607391	F051952	MPKNPRQTIAPDHFTSTALSESSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGT
Ga0099788_1150402	Ga0099788_11504021	F091427	MLVVGVYYAGISTTISITNLLVTRRTLTMPGMRNRRIIIPFITITVLLMLRALAVITPVLGSAMLMLILDRH*
Ga0099788_1202311	Ga0099788_12023111	F025291	FRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099788_1204643	Ga0099788_12046431	F037756	LFPVPTLGAHLAAAAGFPTPFSAANGVSGLVAGPSNLSRG*
Ga0099788_1205865	Ga0099788_12058651	F070166	SKIAYGKDFSLIELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENLLFLLKVIDNEPNISNQEKLQGLRRSLEIKARIERIDPNWRNSQITEASKGRI
Ga0099788_1209953	Ga0099788_12099533	F014988	PTYTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL*