3300007170: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A4L_L (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300007170
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123869 | Ga0099774
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A4L_L (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 31354434
• Sequencing Scaffolds: 6
• Novel Protein Genes: 6
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	5
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Klosterneuburg, Austria
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002557	Metagenome / Metatranscriptome	548	Y
F025291	Metagenome / Metatranscriptome	202	N
F036109	Metagenome / Metatranscriptome	170	Y
F051952	Metatranscriptome	143	N
F059886	Metagenome / Metatranscriptome	133	Y
F070166	Metatranscriptome	123	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099774_1010607	Not Available	761
Ga0099774_1017219	Not Available	1336
Ga0099774_1042220	Not Available	1083
Ga0099774_1059904	Not Available	548
Ga0099774_1090807	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	559
Ga0099774_1111365	Not Available	623

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099774_1010607	Ga0099774_10106072	F059886	VIYASRTAFADLRGERHQLSPTIPRSPGIIPAVLSVAPFRPLRFD
Ga0099774_1017219	Ga0099774_10172193	F051952	VYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLTRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFNTSRVQLFPQKKPGEKLHSSSN*
Ga0099774_1042220	Ga0099774_10422201	F070166	MNLNNYIVQIHRKTKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQTKCSTDVHFREKFGRSLEVLAKILKECNFSRGLQSGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSISTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPKPEEDGSPSWQEVGSEFSNLEREHTEAMLFLLKVYDNDPNISIKERLEGIKRA
Ga0099774_1059904	Ga0099774_10599041	F025291	KQPNQKRTNKNSNKTKHHMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNL
Ga0099774_1090807	Ga0099774_10908071	F036109	MPGLRNRKILMPFISINLFLTMRMLSMIVPVLGAAMIMLQLDRHFNFSFFDY
Ga0099774_1111365	Ga0099774_11113651	F002557	VLMHSSNHYPLGNCDSPKPETSLDYLTRLGAVSNRSSSPSSFFAFTDSARTLPEELVNPA