Metagenome / Metatranscriptome Family F036109

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036109
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	45 residues
Representative Sequence	MPGLRNRRVLLPFITIALFLTMRMLALITPVLGAAMIMLLLDRH
Number of Associated Samples	109
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	47.34 %
% of genes near scaffold ends (potentially truncated)	31.76 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Eukaryota (88.824 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (15.294 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (37.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF00115	COX1	48.82
PF00146	NADHdh	11.18

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	11.18
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	11.18

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.47 %
Unclassified	root	N/A	3.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.88 %
Unclassified	root	N/A	3.53 %
Viruses	superkingdom	All Organisms → Viruses	0.59 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	88.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.06 %
Unclassified	root	N/A	3.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	88.82 %
Unclassified	root	N/A	3.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	88.82 %
Unclassified	root	N/A	3.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Ciliophora	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	88.82 %
Unclassified	root	N/A	3.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Intramacronucleata	subphylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	17.65 %
Unclassified	root	N/A	3.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Name	Rank	Taxonomy	Distribution
Oligohymenophorea	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	3.53 %
Unclassified	root	N/A	3.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.18 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004054\|Ga0063232_10250136	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	535	Open in IMG/M
3300004769\|Ga0007748_11533455	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	712	Open in IMG/M
3300004797\|Ga0007764_11436441	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	634	Open in IMG/M
3300004797\|Ga0007764_11594788	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	572	Open in IMG/M
3300007170\|Ga0099774_1090807	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	559	Open in IMG/M
3300007230\|Ga0075179_1598585	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1093	Open in IMG/M
3300007239\|Ga0075171_1439456	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1879	Open in IMG/M
3300007239\|Ga0075171_1456343	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	986	Open in IMG/M
3300007239\|Ga0075171_1467684	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1229	Open in IMG/M
3300007240\|Ga0075176_1105161	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1028	Open in IMG/M
3300007240\|Ga0075176_1787519	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	683	Open in IMG/M
3300007244\|Ga0075167_10838256	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	646	Open in IMG/M
3300007304\|Ga0102689_1002420	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2074	Open in IMG/M
3300007319\|Ga0102691_1004517	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1972	Open in IMG/M
3300007321\|Ga0102692_1139104	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1616	Open in IMG/M
3300007534\|Ga0102690_1022288	Not Available	2089	Open in IMG/M
3300007534\|Ga0102690_1734617	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1251	Open in IMG/M
3300007623\|Ga0102948_1015305	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2639	Open in IMG/M
3300007623\|Ga0102948_1194867	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	616	Open in IMG/M
3300007777\|Ga0105711_1214812	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	603	Open in IMG/M
3300008031\|Ga0099817_1532559	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1894	Open in IMG/M
3300008111\|Ga0114344_1093307	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1630	Open in IMG/M
3300008116\|Ga0114350_1040482	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1768	Open in IMG/M
3300008119\|Ga0114354_1029951	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2418	Open in IMG/M
3300008119\|Ga0114354_1200672	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	692	Open in IMG/M
3300008262\|Ga0114337_1212821	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	775	Open in IMG/M
3300008832\|Ga0103951_10547263	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	628	Open in IMG/M
3300008929\|Ga0103732_1000072	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	6195	Open in IMG/M
3300008936\|Ga0103739_1013762	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	998	Open in IMG/M
3300008993\|Ga0104258_1016464	Not Available	1371	Open in IMG/M
3300008993\|Ga0104258_1023816	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1144	Open in IMG/M
3300009011\|Ga0105251_10051932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1953	Open in IMG/M
3300009095\|Ga0079224_101553061	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	939	Open in IMG/M
3300009151\|Ga0114962_10168240	All Organisms → Viruses → Predicted Viral	1304	Open in IMG/M
3300009183\|Ga0114974_10070763	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2288	Open in IMG/M
3300009185\|Ga0114971_10483322	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	694	Open in IMG/M
3300009225\|Ga0103851_1003700	Not Available	1957	Open in IMG/M
3300009225\|Ga0103851_1045228	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	729	Open in IMG/M
3300009235\|Ga0103857_10016838	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1228	Open in IMG/M
3300009235\|Ga0103857_10026689	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1026	Open in IMG/M
3300009235\|Ga0103857_10115504	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	557	Open in IMG/M
3300009235\|Ga0103857_10148066	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	502	Open in IMG/M
3300009243\|Ga0103860_10036505	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	942	Open in IMG/M
3300009243\|Ga0103860_10037596	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	931	Open in IMG/M
3300009247\|Ga0103861_10013963	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1039	Open in IMG/M
3300009281\|Ga0103744_10031790	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1230	Open in IMG/M
3300009402\|Ga0103742_1021841	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	800	Open in IMG/M
3300009432\|Ga0115005_10049629	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300009433\|Ga0115545_1041323	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1809	Open in IMG/M
3300009436\|Ga0115008_10440647	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	926	Open in IMG/M
3300009449\|Ga0115558_1395638	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	540	Open in IMG/M
3300009510\|Ga0116230_10190512	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1675	Open in IMG/M
3300009510\|Ga0116230_10575791	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	856	Open in IMG/M
3300009543\|Ga0115099_10328710	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	692	Open in IMG/M
3300009543\|Ga0115099_10682484	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1614	Open in IMG/M
3300009592\|Ga0115101_1753936	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300009599\|Ga0115103_1229945	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	989	Open in IMG/M
3300009599\|Ga0115103_1332127	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	726	Open in IMG/M
3300009599\|Ga0115103_1332614	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	556	Open in IMG/M
3300009599\|Ga0115103_1764296	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2197	Open in IMG/M
3300009599\|Ga0115103_1886150	All Organisms → cellular organisms → Bacteria → Proteobacteria	2909	Open in IMG/M
3300009606\|Ga0115102_10133865	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	2088	Open in IMG/M
3300009608\|Ga0115100_10497540	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	686	Open in IMG/M
3300009677\|Ga0115104_10258410	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1089	Open in IMG/M
3300009677\|Ga0115104_10272877	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	2051	Open in IMG/M
3300009677\|Ga0115104_10369429	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2039	Open in IMG/M
3300009677\|Ga0115104_10739383	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	983	Open in IMG/M
3300009677\|Ga0115104_10970513	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1156	Open in IMG/M
3300009677\|Ga0115104_11183802	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	533	Open in IMG/M
3300009677\|Ga0115104_11268080	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1187	Open in IMG/M
3300009679\|Ga0115105_10304697	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300009679\|Ga0115105_10304714	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	794	Open in IMG/M
3300009679\|Ga0115105_10632005	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1975	Open in IMG/M
3300009679\|Ga0115105_10639305	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	725	Open in IMG/M
3300009679\|Ga0115105_10738070	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1673	Open in IMG/M
3300009679\|Ga0115105_10871768	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	704	Open in IMG/M
3300009679\|Ga0115105_10931643	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	834	Open in IMG/M
3300009697\|Ga0116231_10098789	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1809	Open in IMG/M
3300009697\|Ga0116231_10578850	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	614	Open in IMG/M
3300009701\|Ga0116228_10936963	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	577	Open in IMG/M
3300009739\|Ga0123362_1019184	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1002	Open in IMG/M
3300009750\|Ga0123368_1019242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1609	Open in IMG/M
3300009750\|Ga0123368_1075161	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	715	Open in IMG/M
3300009754\|Ga0123364_1032973	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	958	Open in IMG/M
3300009756\|Ga0123366_1001850	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	806	Open in IMG/M
3300009873\|Ga0131077_10422881	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1592	Open in IMG/M
3300010135\|Ga0123382_1048608	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1664	Open in IMG/M
3300010188\|Ga0127505_1091574	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	639	Open in IMG/M
3300010198\|Ga0127509_1033524	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1289	Open in IMG/M
3300010430\|Ga0118733_103212779	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	892	Open in IMG/M
3300010885\|Ga0133913_11123306	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2022	Open in IMG/M
3300011081\|Ga0138575_1071209	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1332	Open in IMG/M
3300012212\|Ga0150985_100076913	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	777	Open in IMG/M
3300012212\|Ga0150985_105891426	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	567	Open in IMG/M
3300012212\|Ga0150985_107738208	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1975	Open in IMG/M
3300012212\|Ga0150985_107988573	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	620	Open in IMG/M
3300012212\|Ga0150985_108564357	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	519	Open in IMG/M
3300012212\|Ga0150985_111532283	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1177	Open in IMG/M
3300012212\|Ga0150985_111580517	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	988	Open in IMG/M
3300012212\|Ga0150985_111930990	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	694	Open in IMG/M
3300012212\|Ga0150985_112591226	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300012212\|Ga0150985_112637793	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	558	Open in IMG/M
3300012212\|Ga0150985_116840373	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1444	Open in IMG/M
3300012212\|Ga0150985_118807734	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2926	Open in IMG/M
3300012212\|Ga0150985_119171701	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	762	Open in IMG/M
3300012212\|Ga0150985_119454322	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1046	Open in IMG/M
3300012212\|Ga0150985_122318166	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	602	Open in IMG/M
3300012413\|Ga0138258_1258660	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	3048	Open in IMG/M
3300012413\|Ga0138258_1637752	All Organisms → cellular organisms → Bacteria	2989	Open in IMG/M
3300012415\|Ga0138263_1206607	All Organisms → cellular organisms → Bacteria	4300	Open in IMG/M
3300012417\|Ga0138262_1211931	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	777	Open in IMG/M
3300012419\|Ga0138260_10055995	All Organisms → cellular organisms → Bacteria → Proteobacteria	3001	Open in IMG/M
3300012419\|Ga0138260_10742423	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	686	Open in IMG/M
3300012469\|Ga0150984_108759198	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	604	Open in IMG/M
3300012469\|Ga0150984_116487222	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1942	Open in IMG/M
3300012469\|Ga0150984_116713815	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2073	Open in IMG/M
3300012469\|Ga0150984_120687952	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	516	Open in IMG/M
3300012518\|Ga0129349_1359915	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300012525\|Ga0129353_1112883	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	699	Open in IMG/M
3300012686\|Ga0157560_1113071	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	796	Open in IMG/M
3300012687\|Ga0157543_1066480	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1335	Open in IMG/M
3300012687\|Ga0157543_1114365	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1457	Open in IMG/M
3300012688\|Ga0157541_1211324	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1046	Open in IMG/M
3300012706\|Ga0157627_1172405	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	584	Open in IMG/M
3300012710\|Ga0157550_1197202	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1038	Open in IMG/M
3300012713\|Ga0157544_1115396	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1401	Open in IMG/M
3300012717\|Ga0157609_1215546	Not Available	1062	Open in IMG/M
3300012724\|Ga0157611_1256967	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1036	Open in IMG/M
3300012730\|Ga0157602_1057324	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	936	Open in IMG/M
3300012748\|Ga0157553_1037587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300012755\|Ga0138281_1163560	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	764	Open in IMG/M
3300012756\|Ga0138272_1034708	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	851	Open in IMG/M
3300012756\|Ga0138272_1037392	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	625	Open in IMG/M
3300012758\|Ga0138285_1052456	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1085	Open in IMG/M
3300012760\|Ga0138273_1204083	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	846	Open in IMG/M
3300012761\|Ga0138288_1160368	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1234	Open in IMG/M
3300012770\|Ga0138291_1220721	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	601	Open in IMG/M
3300012780\|Ga0138271_1288551	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	653	Open in IMG/M
3300012780\|Ga0138271_1309152	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	743	Open in IMG/M
3300012782\|Ga0138268_1626535	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	740	Open in IMG/M
3300012942\|Ga0164242_10003303	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	18443	Open in IMG/M
3300012943\|Ga0164241_10983436	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	619	Open in IMG/M
3300012954\|Ga0163111_10049338	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	3269	Open in IMG/M
3300012956\|Ga0154020_10007916	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	12363	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10014832	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	8804	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10182817	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1448	Open in IMG/M
3300013295\|Ga0170791_10145014	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1774	Open in IMG/M
3300013295\|Ga0170791_11194880	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1919	Open in IMG/M
3300013295\|Ga0170791_12642153	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	773	Open in IMG/M
3300013295\|Ga0170791_13120186	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	635	Open in IMG/M
3300014832\|Ga0119905_1064998	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	996	Open in IMG/M
3300015350\|Ga0182163_1184734	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	652	Open in IMG/M
3300018996\|Ga0192916_10003770	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	2311	Open in IMG/M
3300021312\|Ga0210306_1191754	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	712	Open in IMG/M
3300021359\|Ga0206689_10492489	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	653	Open in IMG/M
3300021967\|Ga0213848_1095263	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	899	Open in IMG/M
3300024546\|Ga0256356_1016927	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1306	Open in IMG/M
3300028330\|Ga0247601_1000688	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	3321	Open in IMG/M
3300030587\|Ga0257209_1023891	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	804	Open in IMG/M
3300032758\|Ga0314746_1010748	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1760	Open in IMG/M
3300032934\|Ga0314741_1055455	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	919	Open in IMG/M
3300033978\|Ga0334977_0283820	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	802	Open in IMG/M
3300033979\|Ga0334978_0412194	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	636	Open in IMG/M
3300033981\|Ga0334982_0226983	Not Available	909	Open in IMG/M
3300033981\|Ga0334982_0514895	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	527	Open in IMG/M
3300034013\|Ga0334991_0018266	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	4164	Open in IMG/M
3300034019\|Ga0334998_0148707	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1503	Open in IMG/M
3300034072\|Ga0310127_001897	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	22567	Open in IMG/M
3300034652\|Ga0316598_078836	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	907	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.12%
Host-Associated	Host-Associated	18.82%
Engineered	Engineered	7.06%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	70.59%
Plants	Host-Associated → Plants	17.65%
Wastewater	Engineered → Wastewater	7.06%
Terrestrial	Environmental → Terrestrial	3.53%
Human	Host-Associated → Human	0.59%
Invertebrates	Host-Associated → Invertebrates	0.59%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	36.47%
Marine	Environmental → Aquatic → Marine	32.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.82%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	5.29%
Peat Moss	Host-Associated → Plants → Peat Moss	4.12%
Soil	Environmental → Terrestrial → Soil	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.76%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.76%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.18%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.59%
Digestive System	Host-Associated → Human → Digestive System	0.59%
Cnidaria	Host-Associated → Invertebrates → Cnidaria	0.59%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	24.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.41%
Oceanic	Environmental → Aquatic → Marine → Oceanic	8.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.29%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	4.71%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.12%
Coastal	Environmental → Aquatic → Marine → Coastal	2.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.35%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	1.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.18%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.18%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.18%
River	Environmental → Aquatic → Freshwater → River	0.59%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.59%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.59%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.59%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.59%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	0.59%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	8.24%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.29%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	4.71%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.35%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.76%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	1.76%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.59%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.59%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.59%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.59%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.59%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.59%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.59%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	0.59%
Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor	0.59%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.29%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.18%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	8.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.65%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.29%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	5.29%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.71%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	4.71%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.12%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	4.12%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.35%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.35%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	1.76%
Ice Edge, Mcmurdo Sound, Antarctica	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica	1.76%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.18%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.18%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	1.18%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	1.18%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.59%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.59%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.59%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.59%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.59%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.59%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.59%
Diffuse Vent Fluid, Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents	0.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.59%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.59%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.59%
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	0.59%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.59%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.59%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.59%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge	0.59%
Wastewater Sludge	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004769	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004797	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007170	Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A4L_L (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300007230	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007239	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007240	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 B green RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007244	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007304	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007319	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007321	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007534	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300007777	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS918_NRZ_DNA CLC_assembly	Environmental	Open in IMG/M
3300008031	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008832	Eukaryotic communities of water collected during the Tara Oceans expedition - TARA_A200000150	Environmental	Open in IMG/M
3300008929	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 1A	Environmental	Open in IMG/M
3300008936	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 3B	Environmental	Open in IMG/M
3300008993	Marine microbial communities from eastern North Pacific Ocean - P1 free-living	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009225	Microbial communities of water from Amazon river, Brazil - RCM4	Environmental	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300009243	Microbial communities of water from Amazon river, Brazil - RCM13	Environmental	Open in IMG/M
3300009247	Microbial communities of water from Amazon river, Brazil - RCM14	Environmental	Open in IMG/M
3300009281	Microbial communities of wastewater sludge from Singapore - Sludge_b1_October	Environmental	Open in IMG/M
3300009402	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 4B	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009739	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_194_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009750	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_206_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009754	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_198_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009756	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_202_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010135	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_257_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010188	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010198	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012415	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012417	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012419	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA10.B_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012518	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012525	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012686	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES055 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012687	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES032 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012688	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES030 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012706	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012710	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES041 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012713	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES033 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012717	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES135 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012724	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES138 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012730	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES126 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012748	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES045 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012755	Freshwater microbial communities from Lake Montjoie, Canada - M_140807_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012756	Freshwater microbial communities from Lake Croche, Canada - C_130709_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012758	Freshwater microbial communities from Lake Simoncouche, Canada - S_130626_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012760	Freshwater microbial communities from Lake Croche, Canada - C_130709_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012761	Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012770	Freshwater microbial communities from Lake Simoncouche, Canada - S_140625_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012780	Freshwater microbial communities from Lake Croche, Canada - C_130625_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012782	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA30.ICE_1m.20151125 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012942	Miracle-Growth compost microbial communities from Emeryville, California, USA - Original compost - Miracle growth compost (MG)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014832	Activated sludge bacterial and viral communities from EBPR bioreactors in Brisbane, Australia - M90108	Engineered	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300018996	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_072 - TARA_N000000839 (ERX1782178-ERR1712156)	Environmental	Open in IMG/M
3300021312	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1072 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021359	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021967	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - AB:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024546	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028330	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 76R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030587	Metatranscriptome of plant litter fungal communities from Pinus contorta in Tenderfoot Creek Experimental Forest, Montana, United States - TCEF3-LITTER (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300032758	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032934	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063232_102501361	3300004054	Freshwater Lake	MPGLRNRRVLLPFITISLLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0007748_115334552	3300004769	Freshwater Lake	MPGLRNRRVLLPFITISLLLTLRMLAVITPVLGASMFMLLMDRH*
Ga0007764_114364412	3300004797	Freshwater Lake	MPGMRHRRILLPFVTIGILFAFRMLALITPVLAAAMIMMALDRH*Q
Ga0007764_115947882	3300004797	Freshwater Lake	MPGLRNRRILLPFISISLFLTMRMLAIVTPVLGAAMIMLFMDRH*
Ga0099774_10908071	3300007170	Activated Sludge	MPGLRNRKILMPFISINLFLTMRMLSMIVPVLGAAMIMLQLDRHFNFSFFDY
Ga0075179_15985851	3300007230	Wastewater Effluent	SAPGLRNRRVLVPFISITLFLVMRMLALITPVLGAALIMLLMDRH*
Ga0075171_14394562	3300007239	Wastewater Effluent	CMPGMRHRRILLPFITISMLFCLRMLALITPVLGAAVIMMALDRH*
Ga0075171_14563431	3300007239	Wastewater Effluent	NLLITRRTLCMPGMRHRRILLPFITISMLFCLRMLALITPVLGAAVIMMALDRH*
Ga0075171_14676842	3300007239	Wastewater Effluent	MPGLRNRRILLPFVSIGLFLALRMLAIITPVLAAAMIMMALDRH*
Ga0075176_11051611	3300007240	Wastewater Effluent	MPGMRHRRILLPFITISILFCLRMLALITPVLGAAVIMMALDRH*
Ga0075176_17875191	3300007240	Wastewater Effluent	MPGMRHRRILLPFITISMLFCLRMLALITPVLGAAVIMMALDRH*
Ga0075167_100633212	3300007244	Wastewater Effluent	LLVTRRTLAMPGLRNRRILLPFTSITILLMLRALAIITPVLGSAMLMLLLDRH*
Ga0075167_108382561	3300007244	Wastewater Effluent	RRTLSMPGLRNRRVLLPFLTITLFLTMRMLTLITPVLGGAMIMLYLDRH*
Ga0102689_10024203	3300007304	Freshwater Lake	MPGLRYRRILLPFLSIALFLTMRMLALITPVLAAAMIMLVMDRH*
Ga0102691_10045172	3300007319	Freshwater Lake	MPGLRNRRVLLPFVTISLFLTMRMLALVTPVLGAAMIMLLMDRH*
Ga0102692_11391043	3300007321	Freshwater Lake	MPGLRNRRVLLPFVTIATLLALRLLVPITPVLAAAMIMMALDRH*
Ga0102690_10222884	3300007534	Freshwater Lake	MPGLRNRRVLLPFITITILLMLRALSVITPVLGSAMLMLLTDRH*
Ga0102690_17346173	3300007534	Freshwater Lake	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLGAAMIMLMMDRH*
Ga0102948_10153051	3300007623	Water	MPGLRNRRVLVPFLSIALFLVMRMLALITPVLGAAMLMLLMDRH*
Ga0102948_11948671	3300007623	Water	LRNRRVLVPFLSTALFLVMRMLALITPVLGAAMLMLLMDRH*
Ga0105711_12148121	3300007777	Diffuse Vent Fluid, Hydrothermal Vents	MPGMRHRRILLPFVSISIFFSLRMLAIITPVLGAAMIMMALDRH*
Ga0099817_15325593	3300008031	Coral	MPGMRHRRVLLPFVTIGIFFAFRMLAIITPVLGAAMIMMALDRH*
Ga0114344_10933071	3300008111	Freshwater, Plankton	TNLLITRRTLSMPGLRYRRVLLPFISIALFLTMRMLVLITPVLAAAMIMLALDRH*
Ga0114350_10404822	3300008116	Freshwater, Plankton	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLGAAMIMLLMDRH*
Ga0114354_10299511	3300008119	Freshwater, Plankton	MPGLRNRRVLLPFVTIALFLTMRMLALVTPVLGAAMIMLLMDRH*
Ga0114354_12006722	3300008119	Freshwater, Plankton	MPGLRNRRVLLPFVTISLFLTMRMLALVTPVLGAAMIMLMMDRH*
Ga0114337_12128211	3300008262	Freshwater, Plankton	MPGLRNRRVLLPFITISLFLTMRMLALVTPVLGAAMIMLLMDRH*
Ga0103951_105472631	3300008832	Marine	NRRFLMPFLTIAVLLTLRFLALITPVLGGCMIMIFTDRH*
Ga0103732_10000724	3300008929	Ice Edge, Mcmurdo Sound, Antarctica	MPGLRNRRVLIPFVTISLFLTMRMLSIITPVLGAALLMLLMDRH*
Ga0103739_10137621	3300008936	Ice Edge, Mcmurdo Sound, Antarctica	RNRRVLLPFISIALFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0104258_10164641	3300008993	Ocean Water	LPFISIALFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0104258_10238161	3300008993	Ocean Water	AMPGLRNRRVLLPFVTISLFLTMRMLALVTPVLGAAMIMLLMDRH*
Ga0105251_100519322	3300009011	Switchgrass Rhizosphere	MPGLRNRRVLLPFVTIALFLTMRMLALITPVLGAAMIMLLLDRH*
Ga0079224_1015530612	3300009095	Agricultural Soil	MPGLRYRRILLPFISIALFLTMRMLALITPVLAAAMIMLVLDRH*
Ga0114962_101682401	3300009151	Freshwater Lake	MPGIRHRRVLLPFISIGIFLALRMLAIITPVLAAAMIMMALDRH*
Ga0114974_100707632	3300009183	Freshwater Lake	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLAAAMIMLMMDRH*
Ga0114971_104833223	3300009185	Freshwater Lake	NRRVLLPFISIFLFLIMRILAIVTPVLGAAMIMLLMDRH*
Ga0103851_10037001	3300009225	River Water	TRRTLSMPGLRHRRVLLPFISIGIFLALRMLAIITPVLAAAMIMMALDRH*
Ga0103851_10452281	3300009225	River Water	MPGLRHRRVLLPFISIGIFSALRMLAIITPVLAAAMIMMALDRH*
Ga0103857_100168384	3300009235	River Water	LRNRRILLPFVTIGLFLAMRMLAIITPVLAAAMIMMALDRH*
Ga0103857_100266892	3300009235	River Water	MPGMRHRRILLPFITIGTLLSLRMLAIITPVLAAAMIMMDLDRH*
Ga0103857_101155042	3300009235	River Water	MPGMRHRRILLPFVSIGIFFALRMLALITPVLAAAMVMMIL
Ga0103857_101480662	3300009235	River Water	MPGLRNRRVLIPFLTITLFLTMRMLTLITPVLGGAMIMLYLDRH*
Ga0103860_100365052	3300009243	River Water	MPGMRHRRILLPFITIGTLLSLRMLAIITPVLAAAMIMMALDRH*
Ga0103860_100375962	3300009243	River Water	MPGLKNRRILMPFITIAILLTLRMLAIITPVLAAAMIMMALDRH*
Ga0103861_100139631	3300009247	River Water	MPGMRHRRVLLPFVTIGIFFAFRMLAIITPVLAAAMIMMILDRH*
Ga0103744_100317903	3300009281	Wastewater Sludge	MPGLKNKKSLIPFLSITLFLTLRMLALITPVLGGAMMMLEFDRH*
Ga0103742_10218411	3300009402	Ice Edge, Mcmurdo Sound, Antarctica	GLKNRRVLIPFITISLFLTMRMLSIITPVLGAALLMLLMDRH*
Ga0115005_100496295	3300009432	Marine	MPGLRNRRILLPFITIALLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0115545_10413231	3300009433	Pelagic Marine	MPGLRNRRVLLPFITIALLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0115008_104406472	3300009436	Marine	MPGLKNRRVLIPFVTISLFLTMRMLTIITPVLGAALLMLLMDRH*
Ga0115558_13956382	3300009449	Pelagic Marine	TNLLITRRTLAMPGLRKRRVLLPFITIALLLTLRMLAVITPVLGASMFMLLMDRH*
Ga0116230_101905124	3300009510	Host-Associated	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLGAAMIMLLLDRH*
Ga0116230_105757912	3300009510	Host-Associated	TNLLITRRTLTMPGMKHRRILLPFVSIGIFFAFRMLALITPVLAAAMIMIILDRH*
Ga0115099_103287102	3300009543	Marine	MPGLRNRRVLLPFISISLFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0115099_106824843	3300009543	Marine	MPGLRNRRILLPFISISLFLTMRMLAIVTPVLGAAMLMLFMDRH*
Ga0115101_17539362	3300009592	Marine	MPGLRNRRVLMPFISIALFLTMRMLAIVTPVLGAAMIMLFMDRH*
Ga0115103_12299451	3300009599	Marine	RRVLLPFISIALFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0115103_13321271	3300009599	Marine	MPGMRHRRVLMPFVTIGTLFALRMLAIITPVLGAAMIMMALDRH*
Ga0115103_13326141	3300009599	Marine	MPGMRHRRVLMPFITIGTLFALRMLAIITPVLGAAMIMMALDRH*
Ga0115103_17642962	3300009599	Marine	MPGLRNRRVLLPFITISLFLTMRMLALVTPVLGAAMVMLLMDRH*
Ga0115103_18861502	3300009599	Marine	MPGLRNRRVLLPFVTIGLFLTMRMLAIVTPVLGASMFMLLMDRH*
Ga0115102_101338654	3300009606	Marine	MPGLRNRRVLLPFISIALFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0115100_104975402	3300009608	Marine	LVTRRTLAMPGLRNRRVLLPFISIALFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0115104_102584101	3300009677	Marine	RVLLPFSTIGTLLALRMLAIITPVLAAAMIMMMLDRH*
Ga0115104_102728772	3300009677	Marine	MPGLRNRRVLLPFVTIALFLTMRMLALVTPVLGAAMVMLLMDRH*
Ga0115104_103694293	3300009677	Marine	MPGLRNRRVLLPFVTIALFLTMRMLAIVTPVLGAAMIMLLMDRH*
Ga0115104_107393832	3300009677	Marine	NRRVLLPFSTIGTLLALRMLAIITPVLGAAMIMMMLDRH*
Ga0115104_109705132	3300009677	Marine	MPGMRNRRVLLPFSTIGTLLALRMLALVTPVLAAAMIMMMLDRH*
Ga0115104_111838021	3300009677	Marine	TRRTLAMPGLRNRRVLLPFISISLFLTMRMLAIVTPILGASMVMLFMDRH*
Ga0115104_112680802	3300009677	Marine	MPGLRNRRVLLPFVTISLFLTMRMLALVTPVLAAAMIMLLMDRH*
Ga0115105_103046972	3300009679	Marine	MPGMRNRRVLLPFSTIGTLLALRMLAIITPVLGAAMIMMMLDRH*
Ga0115105_103047141	3300009679	Marine	RTLAMPGMRNRRVLLPFSTIGTLLALRMLAIITPVLGAAMIMMMLDRH*
Ga0115105_106320052	3300009679	Marine	MPGMRNRRVLLPFSTIGTLLALRMLALVTPVLGAAMIMMSLDRH*
Ga0115105_106393051	3300009679	Marine	LVTRRTLAMPGMRNRRVLLPFSTIGTLLALRMLAIITPVLGAAMIMMMLDRH*
Ga0115105_107380702	3300009679	Marine	MPGMRNRRVLLPFATIGILLALRLLALVTPVLAAAMIMMELDRH*
Ga0115105_108717681	3300009679	Marine	MPGMRNRRVLLPFSTIGTLLALRMLAIITPVLGAAMIMMLLDRH*
Ga0115105_109316431	3300009679	Marine	MPGMRNRRVLLPFSTIGTLLALRMLALVTPVLGAAMIMMMLDRH*
Ga0116231_100987892	3300009697	Host-Associated	MPGMRNRRILLPFVSLGIFFAFRMLALITPVLAAAMIMMILDRH*
Ga0116231_105788501	3300009697	Host-Associated	MPGMRHRRILLPFVSIGIFFAFRMLALVTPVLAAAMIMLLCDRH*
Ga0116228_109369631	3300009701	Host-Associated	MPGMRHRRILLPFVSIGIFFAFRMLALITPVLAAAMIMMILDRH*
Ga0123362_10191841	3300009739	Marine	MPGMRHRRVLLPFVSIGIFFALRMLALITPVLAAAMVMMVLDRH*
Ga0123368_10192422	3300009750	Marine	MPGLRNRRALIPFITIALLLVLRMLAIITPVLGAAMFMLLMDRH*
Ga0123368_10751611	3300009750	Marine	MPGMRHRRVLLPFITIGTLFALRMLAAITPVLGAAMIMMALDRH*
Ga0123364_10329732	3300009754	Marine	MPGLRNRRALIPFITISLLLVLRMLAIITPVLGAAMFMLLMDRH*
Ga0123366_10018501	3300009756	Marine	RNRRVLLPFITIALLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0131077_104228812	3300009873	Wastewater	MPGLRNRKVLIPFITISLLLTMRMLAIVTPVLGAAMFMLLMDRH*
Ga0123382_10486083	3300010135	Marine	MPGMRHRRVLLPFITIGTFFAFRMLAIITPVLGAAMVMMALDRH*
Ga0127505_10915741	3300010188	Host-Associated	MPGMRHRRILLPFITISILFTLRMLALITPVLGAAVIMMALDRH*
Ga0127509_10335242	3300010198	Host-Associated	MPGMRNRRILLPFVSIGIFFAFRMLALITPVLAAAMIMMILDRH*
Ga0118733_1032127792	3300010430	Marine Sediment	MPGMRHRRVLLPFITIGIFFAFRMLAIITPVLGAAMIMMALDRH*
Ga0133913_111233062	3300010885	Freshwater Lake	MPGLRNRRVLLPFISISLFLTMRMLAIVTPVLGAAMIMLLMDRH*
Ga0138575_10712092	3300011081	Peatlands Soil	MPGIRHRRILLPFISIGIFFAFRMLALITPVLGAAMIMMILDRH*
Ga0150985_1000769131	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFITIALFLTMRMLALITPVLGAAMIMLLLDRH*
Ga0150985_1058914261	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFMTIALFLTMRMLALITPVIAGAMIMLLLDRH*
Ga0150985_1077382083	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFMTIALFLTMRMLALITPVLGAAMIMLLLDRH*
Ga0150985_1079885732	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLMPFITISLFLTMRMLALVTPVLGAAMIMLLLDRH*
Ga0150985_1085643571	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLAAAMIMLLMDRH*
Ga0150985_1115322831	3300012212	Avena Fatua Rhizosphere	PGLRNRRVLLPFITIALFLTMRMLALVTPVLGAAMIMLLLDRH*
Ga0150985_1115805172	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLGAAMVMLLLDRH*
Ga0150985_1119309901	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFMTIALFLTMRMLALVTPVLGAAMIMLLLDRH*
Ga0150985_1125912262	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFITIALFLTMRMLALITPVLAAAMIMLLADRH*
Ga0150985_1126377931	3300012212	Avena Fatua Rhizosphere	MPGLRNRRVLLPFITISLFLTMRMLALVTPVLGAAMIMLLLDRH*
Ga0150985_1168403733	3300012212	Avena Fatua Rhizosphere	MPGLRHRKHLLPFVTIGLLLAMRMLALITPVLAAAMFMMLLDRH*
Ga0150985_1188077345	3300012212	Avena Fatua Rhizosphere	MPGLRNRKHLLPFVTIGLLLAMRLLALITPVLAAAMIMMILDRH*
Ga0150985_1191717011	3300012212	Avena Fatua Rhizosphere	MPGLRYRRVLLPFLTIALFLTMRMLALITPVLAGAMIMLILDRH*
Ga0150985_1194543222	3300012212	Avena Fatua Rhizosphere	HRKHLLPFVTIGLLLAMRMLALITPVLAAAMFMMLLDRH*
Ga0150985_1223181662	3300012212	Avena Fatua Rhizosphere	LLPFMTIALFLTMRMLALITPVLGAAMIMLLLDRH*
Ga0138258_12586602	3300012413	Polar Marine	MPGMRHRRVLLPFVTIGTLFALRMLAIITPVLGAAMIMMALDRH*
Ga0138258_16377522	3300012413	Polar Marine	MPGLRHRRVLLPFVTIGIFFAFRMLAIITPVLGAAMIMMALDRH*
Ga0138263_12066072	3300012415	Polar Marine	MPGLRHRRVLLPFVTIGIFFAFRMLAIITPFLGAAMIMMALDRH*
Ga0138262_12119311	3300012417	Polar Marine	RTLCMPGMRHRRVLLPFVTIGMLFALRMLAIITPVLGAAMIMMALDRH*
Ga0138260_100559952	3300012419	Polar Marine	MPGMRHRRVLLPFVTIGIFFAFRMLAIITPVLGAAMIMMALDRHWQTTFF*
Ga0138260_107424231	3300012419	Polar Marine	NRRVLIPFVTISLFLTMRMLTIITPVLGAALLMLLMDRH*
Ga0150984_1087591981	3300012469	Avena Fatua Rhizosphere	MPGLRNRRVLLPFMTISLFLTMRMLALITPVLGAAMIMLLLDRH*
Ga0150984_1164872222	3300012469	Avena Fatua Rhizosphere	MPGMRHRRVLLPFVSIGIFFAFRMLALITPVLGAAMIMMALDRH*
Ga0150984_1167138153	3300012469	Avena Fatua Rhizosphere	MPGLRYRRVLLPFISIALFLTMRMLVLITPVLAAAMIMLALDRH*
Ga0150984_1206879521	3300012469	Avena Fatua Rhizosphere	MPGMRHRRILLPFVTIGVLFALRMLAAITPVLGAAMIMMALDRH*
Ga0129349_13599155	3300012518	Aqueous	MPGLRNRRVLLPFITISLFLTMRMLAIVTPVLGASMVMLLMDRH*
Ga0129353_11128831	3300012525	Aqueous	LAMPGLRNRRVLLPFITISLFLTMRMLAIVTPVLGASMVMLLMDRH*
Ga0157560_11130711	3300012686	Freshwater	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLAAAMVMLLMDRH*
Ga0157543_10664803	3300012687	Freshwater	MPGLRNRRVLLPFISIALFLTMRMLALVTPVLAAAMIMLLMDRH*
Ga0157543_11143654	3300012687	Freshwater	MPGLRYRRVLMPFISIALFLTMRMLVLITPVLAAAMIMLALDRH*
Ga0157541_12113241	3300012688	Freshwater	VLLPFITISLLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0157627_11724051	3300012706	Freshwater	RTLAMPGLRNRRVLLPFVTIALFLTMRMLALVTPVLGAAMIMLLMDRH*
Ga0157550_11972021	3300012710	Freshwater	VLMPFISIALFLTMRMLVLITPVLAAAMIMLALDRH*
Ga0157544_11153961	3300012713	Freshwater	TNLLITRRTLAMPGLRNRRVLLPFITISLLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0157609_12155461	3300012717	Freshwater	RNRRVLLPFVTISLLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0157611_12569671	3300012724	Freshwater	NRRVLLPFVTIATLLALRLLVPITPVLAAAMIMMALDRH*
Ga0157602_10573241	3300012730	Freshwater	AMPGLRNRRVLLPFVTISLFLTMRMLALVTPVLGAAMIMLMMDRH*
Ga0157553_10375871	3300012748	Freshwater	ITRRTLAMPGLRNRRVLLPFITISLLLTLRMLAIITPVLGASMFMLLMDRH*
Ga0138281_11635601	3300012755	Freshwater Lake	RRTLAMPGLRNRRVLLPFITISLLLTLRMLAVITPVLGASMFMLLMDRH*
Ga0138272_10347081	3300012756	Freshwater Lake	RTLAMPGLRNRRILLPFITIALLLTLRMLAAITPVLGASMFMLLMDRH*
Ga0138272_10373921	3300012756	Freshwater Lake	MPGLRNRRVLLPFISISLFLTMRMLALVTPVLAAAMIMLLMDRH*
Ga0138285_10524563	3300012758	Freshwater Lake	RRVLLPFISISLFLTMRMLAIVTPVLGAAMIMLFMDRH*
Ga0138273_12040831	3300012760	Freshwater Lake	NRRILLPFISISLFLTMRMLAIVTPVLGAAMIMLFMDRH*
Ga0138288_11603681	3300012761	Freshwater Lake	MPGLRNRRVLLPFITISILLTLRMLAVVTPVLGASMFMLLMDRH*
Ga0138291_12207211	3300012770	Freshwater Lake	TLSMPGLKHRKTLIPFLSINLFLTMRMLALITPVLAAAMIMLQLDRH*
Ga0138271_12885511	3300012780	Freshwater Lake	RRTLSMPGMRYRRILLPFITISLFLTMRMLAIVTPILGAAMIMLFMDRH*
Ga0138271_13091522	3300012780	Freshwater Lake	PGLRNRRILLPFISISLFLTMRMLAIVTPVLGAAMIMLFMDRH*
Ga0138268_16265352	3300012782	Polar Marine	MPGMRHRRVLLPFVTIGIFFSFRMLAIITPVLGAAMIMMALDRH*
Ga0164242_100033035	3300012942	Compost	MPGLRNRRVLMPFITISLFLTMRMLALITPVLGAAMIMLLLDRH*
Ga0164241_109834361	3300012943	Soil	MPGLRYRRILLPFISIALFLTMRMLALITPVLAAGMIMLLLDRH*
Ga0163111_100493382	3300012954	Surface Seawater	LAAPGFKNRKNTIPFLSISLFLVMRMLALITPVLGAAMVMLLMDRH*
Ga0154020_100079168	3300012956	Active Sludge	MPGLRNRRVLLPFVTITTLLALRLLVPITPVLGAAMIMMALDRH*
(restricted) Ga0172373_1001483212	3300013131	Freshwater	MPGMRNRRALMPFITIALLLTMRMLAAVTPVLAAAMFMLLMDRH*
(restricted) Ga0172373_101828173	3300013131	Freshwater	MPGMRHRRILLPFITITILFSLRMLALITPVLGAAMIMMMLDRH*
Ga0170791_101450143	3300013295	Freshwater	MPGLRSRRVLLPFITISLFLTMRMLAIVTPVLGAAMIMLFMDRH*
Ga0170791_111948803	3300013295	Freshwater	MPGLRNRRVLLPFITIALFLTMRMLALVTPVLAAAMIILMMDRH*
Ga0170791_126421531	3300013295	Freshwater	MPGMRHRRILLPFITIGTLLALRMLAIITPVLAAAMIMMTLDRH*
Ga0170791_131201861	3300013295	Freshwater	MPGLRNRRVLLPFISIALFLTMRMLALVTPVLAAAMIMLMMDRH*
Ga0119905_10649981	3300014832	Activated Sludge	MPGMRHRRILLPFVTIGTLFAFRMLAIVTPVLGAAMIMMALDRH*
Ga0182163_11847341	3300015350	Switchgrass Phyllosphere	MPGLRNRRVLLPFITIALFLTMRMLALITPVLGAAMIMLLMDRH*
Ga0192916_100037702	3300018996	Marine	MPGLRNRRVLMPFVTVALLLSLRMLVLITPVLAAAMFMVLADRH
Ga0210306_11917543	3300021312	Estuarine	LLITRRTLAMPGLRNRRVLLPFITIALLLTLRMLAVITPVLGASMFMLLMDRH
Ga0206689_104924891	3300021359	Seawater	MPGLNNRRFLIPFLTIGILLALRFLALITPVLGGAMIMIFTDRH
Ga0213848_10952631	3300021967	Watersheds	TNLLITRRTLAMPGLRNRRVLLPFITISILLTLRMLAIITPVLGASMVMLMMDRH
Ga0256356_10169272	3300024546	Freshwater	MPGMRHRRVLLPFVTIGTLFALRMLAIITPVLGAAMIMMALDRH
Ga0247601_10006882	3300028330	Seawater	MPGFRNRRALLPFVTISLLLTMRMLAVVTPVLGASMFMLLMDRHWQTTFF
Ga0257209_10238911	3300030587	Host-Associated	MPGMRHRRILLPFITISILFALRMLAVVTPVLAAAMIMMA
Ga0314746_10107483	3300032758	Switchgrass Phyllosphere	MPGLRNRRVLLPFITISLFLTMRMLALVTPVLGAAMIMLLLDRH
Ga0314741_10554551	3300032934	Switchgrass Phyllosphere	RTLSMPGLRNRRVLLPFITIALFLTMRMLALVTPVLGAAMIMLLLDRH
Ga0334977_0283820_4_138	3300033978	Freshwater	MPGLKNRRILMPFITIAILLTLRMLAIITPVLAAAMIMMALDRH
Ga0334978_0412194_247_381	3300033979	Freshwater	MPGLRNRRILLPFITIGLFLAMRMLAIITPVLAAAMIMMALDRH
Ga0334982_0226983_38_172	3300033981	Freshwater	MPGLRHRRILLPFVSIGILLAFRMLALVTPVLAAAMIMMALDRH
Ga0334982_0514895_381_515	3300033981	Freshwater	MPGFRHRRILLPFVTIGIFLAFRMLAVVTPVLAAAMIMMALDRH
Ga0334991_0018266_2047_2181	3300034013	Freshwater	MPGLRNRRVLLPFVTIATLLALRLLVPITPVLAAAMIMMALDRH
Ga0334998_0148707_313_447	3300034019	Freshwater	MPGLKNRRILMPFITIAILLTLRMLAIITPVLAAAMIMMSLDRH
Ga0310127_001897_5730_5864	3300034072	Fracking Water	MPGLRHRRVLMPFVTISIFLTLRMLATITPVLGAAVIMMAFDRH
Ga0316598_078836_42_167	3300034652	Untreated Peat Soil	MRHRRVLMPFITISIFLTLRMLATITPVLGAAVIMMAFDRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters