3300006646: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A3_L (Metagenome Metatranscriptome)

Overview

Basic Information

• IMG/M Taxon OID: 3300006646
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0103597 | Gp0123868 | Ga0099770
• Sample Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A3_L (Metagenome Metatranscriptome)
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 105371047
• Sequencing Scaffolds: 9
• Novel Protein Genes: 11
• Associated Families: 10

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
Not Available	5
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Klosterneuburg, Austria
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001758	Metagenome / Metatranscriptome	640	Y
F004023	Metagenome / Metatranscriptome	456	Y
F025291	Metagenome / Metatranscriptome	202	N
F025295	Metagenome / Metatranscriptome	202	Y
F039594	Metagenome / Metatranscriptome	163	Y
F052619	Metagenome / Metatranscriptome	142	Y
F059886	Metagenome / Metatranscriptome	133	Y
F070166	Metatranscriptome	123	N
F093948	Metagenome / Metatranscriptome	106	Y
F105419	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0099770_1021328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	543
Ga0099770_1060655	Not Available	506
Ga0099770_1277017	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	731
Ga0099770_1277082	All Organisms → cellular organisms → Eukaryota	620
Ga0099770_1278192	Not Available	1016
Ga0099770_1283551	Not Available	685
Ga0099770_1297252	Not Available	821
Ga0099770_1299651	Not Available	870
Ga0099770_1305874	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	582

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099770_1021328	Ga0099770_10213281	F059886	VIYASRAAFAVLRGGRHQLSPTFPRSPGIIPAVLSVAPFRPLRFD
Ga0099770_1029325	Ga0099770_10293251	F001758	VTGERSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER*
Ga0099770_1060655	Ga0099770_10606551	F025295	IMVTGPGDATELLRRREVLIPEKLKFLTRKSNLQKPI*
Ga0099770_1241957	Ga0099770_12419571	F004023	FSFLIIQLVVFLGLVLCCTHLSEITLTIAANALHTIFFFKGKAY**LFTDRFLNTDTLVRLAYLHYVSAFFLAFLGVIHGTDMHYD*KNEDTCEGIRIEMI*WDEALLNEFSKTIDIIFLIGFFCFFLYEMPEALIYEIFMWGDVGFINDIRFYGVAPH*YFRPLMA*LLVCPFHKLGIAGLVFFFVVLFF
Ga0099770_1277017	Ga0099770_12770171	F039594	PQSMRWRVVVTSGEGVLVTVRNHRCPLQATWIKEVWCDAAYFDRPWMCDIEILTRAAHPGDNVYFVAVYGKNATYSIAFWRGRENCHAFTGSGRDDGLNFCAGLVPYATWRWDNYDNLDKEAHCFYEDLYNHFKCQPCWNGVSRECNATLQAFACYESFRKCDKNGFAVGTCKDSCEAVVYECANHFDSVNLEHYNCSSSRYIDGGASECAGNENFSSFSSETQLFLEDDPQLILFKSSPTAA
Ga0099770_1277082	Ga0099770_12770823	F093948	MAVLFPKKVTAIFNPFGGISQILDLMLFGIHSTKYDEFLF*
Ga0099770_1278192	Ga0099770_12781923	F052619	VPITARSQNKRGASRRVSQNKSSGQSSFTMNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNERHYAIKVAVPPTGVAMTFRSRVKFFVECANVN*
Ga0099770_1283551	Ga0099770_12835511	F025291	MVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKATTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK
Ga0099770_1297252	Ga0099770_12972521	F025291	KHHMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099770_1299651	Ga0099770_12996511	F070166	NVVLSGVVMNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQLVGSEFGNLERESTELILKLMKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRHKV*
Ga0099770_1305874	Ga0099770_13058741	F105419	RMLGTTTRTLGAKDTIMRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPERQY*