3300005800: Sediment microbial communities of hot springs in Rotorua, New Zealand ? Tikitere hot spring, NZ13

Overview

Basic Information

• IMG/M Taxon OID: 3300005800
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0116259 | Gp0119890 | Ga0079639
• Sample Name: Sediment microbial communities of hot springs in Rotorua, New Zealand ? Tikitere hot spring, NZ13
• Sequencing Status: Permanent Draft
• Sequencing Center: Oak Ridge National Laboratory
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 195583763
• Sequencing Scaffolds: 22
• Novel Protein Genes: 24
• Associated Families: 13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	11
All Organisms → cellular organisms → Archaea → Euryarchaeota	1
Not Available	2
All Organisms → cellular organisms → Archaea	3
All Organisms → cellular organisms → Archaea → TACK group	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Archaeoglobi → Archaeoglobales → unclassified Archaeoglobales → Archaeoglobales archaeon	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Sediment Microbial Communities Of Hot Springs In Rotorua, New Zealand
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Thermal Hot Spring → Sediment Microbial Communities Of Hot Springs In Rotorua, New Zealand

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → hot spring → sediment
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Rotorua, NZ
• Coordinates
  • Lat. (^o): -38.0631325
  • Long. (^o): 176.360798
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004454	Metagenome / Metatranscriptome	437	Y
F013170	Metagenome	273	Y
F020112	Metagenome	226	Y
F025877	Metagenome	200	Y
F038537	Metagenome	165	Y
F051554	Metagenome	144	Y
F062402	Metagenome	130	Y
F064214	Metagenome	129	Y
F076768	Metagenome	117	Y
F078228	Metagenome	116	Y
F079345	Metagenome / Metatranscriptome	116	Y
F102093	Metagenome	102	Y
F103293	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0079639_1000240	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	20752
Ga0079639_1000344	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	17385
Ga0079639_1001000	All Organisms → cellular organisms → Archaea → Euryarchaeota	10150
Ga0079639_1001466	Not Available	8207
Ga0079639_1001807	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7324
Ga0079639_1002071	All Organisms → cellular organisms → Archaea	6763
Ga0079639_1002579	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	5940
Ga0079639_1004600	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4224
Ga0079639_1006524	All Organisms → cellular organisms → Archaea	3413
Ga0079639_1008930	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2813
Ga0079639_1014399	All Organisms → cellular organisms → Archaea	2097
Ga0079639_1015742	All Organisms → cellular organisms → Archaea → TACK group	1989
Ga0079639_1016328	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1944
Ga0079639_1016965	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1893
Ga0079639_1017000	Not Available	1891
Ga0079639_1020992	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1652
Ga0079639_1023462	All Organisms → cellular organisms → Archaea → TACK group	1539
Ga0079639_1039861	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1090
Ga0079639_1065051	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	789
Ga0079639_1075693	All Organisms → cellular organisms → Archaea → Euryarchaeota → Archaeoglobi → Archaeoglobales → unclassified Archaeoglobales → Archaeoglobales archaeon	714
Ga0079639_1083505	All Organisms → cellular organisms → Archaea → Euryarchaeota → Archaeoglobi → Archaeoglobales → unclassified Archaeoglobales → Archaeoglobales archaeon	669
Ga0079639_1099693	All Organisms → cellular organisms → Archaea → Euryarchaeota → Archaeoglobi → Archaeoglobales → unclassified Archaeoglobales → Archaeoglobales archaeon	594

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079639_1000240	Ga0079639_100024015	F102093	MMCTYIRLSINMPAKSEHKIMKHGTSSVVVIPKPYRDYHGLKPGTPVTVLYDTLLLIVPKNLEPLLREKQHLIDMLLGQKVEGEK*
Ga0079639_1000344	Ga0079639_10003445	F038537	MHRAVYFWRGLYPLLCRFCREYGVPFNRVVNLAVQRFLGGCDVGELRLRARLALLLREEVELRRVCNAMLRSGSYLPGYVQRVLREPGRPLTHIPDAQRPLKALNPREERVFRKIAARREQIAREIAEIEEQLLRDVKPFRLKPDLRGSRSRRRLCGKTNLKEVKKSNGETA*
Ga0079639_1001000	Ga0079639_10010003	F013170	MSVHLHTTITKKANDILEELAKTYGTKSRVLEKALETLLRVDKVGSCNDCAIKAKVSEQTKLREALDLTSISRRNLDSLLEIAIGNKTIEDFIKEQKAEAKNTIEILRSSISWKPPSNFKEFLIVLEEIRNLTNMYEIPSYSEIDNIAILRPKVFKRLPIIVAFNVATILEGIGVYFDIRVMGEDIAVKMVRPEVYPLRKKEFGEFLEQQIEKELANVTPGFFKSTLMLVGPAFMNWAEKHLEEPITDLGNLLEDARIVLGVDEFPKEPKDFVKALLSAFVKMNWFKQAKVLIEKDENVLKIVFQATSTSITRMSLAALSVILATRGWKTLNYSTEHATVNMTIQYVGAEDQSILDQLAELSLFQVIGKQFLDVIPVPRDLFNSFALKVYESDRRKFDEIYRATGTRISNAIRMLARNDTEKIRRLAKNFILKNINATQPDAEVRFVDDEHFTIIFKRIDPLVMNSQRVLIESMFRELGYEITTTAFQNLLSFKLKLLEKPILEPLPRKKLMQTLIEGMSCNSVEEAFAIEKEQLDELFPEDYPWTIREVGERITDMYRELGVEVEIEYFEGGFTLKYKSCPYYKLVKTGQKTWLCSLRKKTIEYIISRVSHGKKGRIKIIKSLLQNEHPCEYAIFLTGFLEKEEKAEAGE*
Ga0079639_1001466	Ga0079639_10014661	F020112	MVSKAFRKCVELVEEMLGKGYTLQITSTEVERLIKIGVGADKRTVQKYLRMLTEDLEFLKVSAKNPLGVVIYRIDVEAIERFIGEHLKEKLRQVKLSDIRLKQENMRHVGLEREKVE*
Ga0079639_1001466	Ga0079639_10014667	F064214	MSGKGDLKVLVKSAEGLALALRDTLDVLADHEQRIKRLEEKLGFLADVESRFVEKLVAGGRCE*
Ga0079639_1001807	Ga0079639_10018071	F079345	MLSEALGLELEGLSTLQRKLLLELLHRRHPQYWSKFTSPDCSWQSQKETLEMFLQNHQTELVKELAKAGLEGNGWKTMRRFGKHVQS*
Ga0079639_1002071	Ga0079639_10020713	F062402	MWWVHIGSVIGLIASSLMTVYWFSRLRLAIAEKGWKYTSTLGVLPWVAVLFSSVYVLLGELMVIQKGGTVDNALLYTLAILYWIVLVALVTGIILDAVIRARRAGENLGFVKTENSN*
Ga0079639_1002579	Ga0079639_10025791	F051554	MGMQLRYYVPFKAQEGVNAEYAIKEKLINIEGVAIDTSVNANKWQVPSADLDYIVETLKGAQLRVDHAESALMVVGKVVDAWRDGDRVLFRAEVGDEKLIEKILRGYITHVSIQVDSDEVECSKCKRPSRKEGMLIHLCPGAWEVVHKPKVRELSIVASPAYKTTEFQPVGFFAAMNENQWDAILKHVVGSQLPDSHGNNVGSR
Ga0079639_1002579	Ga0079639_10025793	F025877	MPGLDEGVTVWRYRVQDPDKFEKFRVKEITEGVKITLGKVKNSDRWEIQNYMFDKKRFKTREQVLNWLEKHLKSEVKTLLDFKAWNEARKRFLQVWLEISRISA*
Ga0079639_1004600	Ga0079639_10046004	F076768	MSYWGKVIGKGNYIVAKVNGVKMVLTSAELKWLLDNGYDVEVVG*
Ga0079639_1006524	Ga0079639_10065243	F103293	MGYIPEDLQKLEELPAPYEIYEFVPGVPAYFEVTDYKIGRIAIHPRWPGAPEEKTIVAIRLYVTPKCKPTSPPYYDITPARLVYALAPILASGKWRGYWLRIVRDIPGPKAHFQVSIVTGPEE*
Ga0079639_1008930	Ga0079639_10089303	F025877	MPGLEEGVTVWRYRVQDPDKFDKFRVKELGNGVKITLGRVKGTDRWEIQNYMFDKKRFKDAESVRNWLEKHLKSEIKTLLDFKAWNEERKRFLQVWLEISRISA*
Ga0079639_1014399	Ga0079639_10143991	F020112	VTGVSKAFKKCVELVEEMLSKGYTLQIPSTEVERLIKMGVGADKRTVQKYMRMLTEDLAFLKTVAKNPLGIIIYRIDVEAIEQFVNEHLKEKLRQVKLSDIRLEQENMRQVGT*
Ga0079639_1015742	Ga0079639_10157422	F079345	MLSEALGLNLEGLSTLQRKLLVELLHRRHPQYWSKFASLKCSWQSQKETLKEFLQNHQTELVKELAKAGLEFNDWKTVRRFGKNAENGAL*
Ga0079639_1016328	Ga0079639_10163283	F076768	MSYWGKIIGKGNYIVAKVNGVRMTLTSAELKWFLDNGYDVEVVG*
Ga0079639_1016965	Ga0079639_10169652	F004454	LSRDFRRTVIEVREDLHREIRKLALLNDLRIYQLANAIIEDYLKDGERVKALIKRLRLQFQPLTQH*
Ga0079639_1017000	Ga0079639_10170001	F078228	MAKKFTMSIPEAMYIALEKERQKRKLGTIQELIRFILADYLKEKST*
Ga0079639_1020992	Ga0079639_10209922	F076768	MSYWGKIIGKGNYIVAKVNGVKMVLTSSELRWFLDNGYDVEVVG*
Ga0079639_1023462	Ga0079639_10234622	F079345	MLSEALGLNLEGLSTLQRKLLLELLHRRHPQYWSKITSPKCSWQSQKETLKEFLQNHQTELVKELAKAGLEFNDWKTVRRFRKNAENGAL*
Ga0079639_1039861	Ga0079639_10398612	F079345	MLPEATGLELEGLSTLQRKLLLELLHRRHPQYWSKFTSPKCSWQSRKETLEMFLQNHKIELVKEFAKAGLEGNGWKTMRRFGKHVQS*
Ga0079639_1065051	Ga0079639_10650512	F079345	MLPEATGLELEGLSTLQRKLLLELLHKRHPQYWSKFTSPKCSWQSRKETLEMFLQNHQIELVKELAKAGLEGNGWKTMRRFGKHVQS*
Ga0079639_1075693	Ga0079639_10756931	F103293	DLQKLEELPAPYEIFEFVPGVPAYFEVTDYKIGRIAIHPRWPGAPEEKTIVAIRLYVTPKCKPSYPPYWDITPARLVYALAPILASGKWRGYWLRIVRDIPGPKAHFQVSIVTGPEE*
Ga0079639_1083505	Ga0079639_10835052	F103293	MGYIPEDLQKLEELPAPYEIFEFVPGVPAYFEVTDYKIGRIAIHPRWPGAPEEKTIVAIRLYVTPKCKPTSPPYYDITPARLVYALAPILASGKWRGYWLRIVRDIPGPKAHFQVSIVTGPE*
Ga0079639_1099693	Ga0079639_10996931	F103293	MGYIPEDLQKLEELPAPYEIFEFVPGVPAYFEVTDYKIGRIAIHPRWPGAPEEKTIVAIRLYVTPKCKPTSPPYYDITPARLVYALAPILASGKWRGYWLRIVRDIPGPKAHFQVSIVTGPEE*