3300003635: Hypersaline viral communities from Bras del Port, Santa Pola, Spain - Lo Valdivia P5

Overview

Basic Information

• IMG/M Taxon OID: 3300003635
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0069917 | Gp0107657 | Ga0061045
• Sample Name: Hypersaline viral communities from Bras del Port, Santa Pola, Spain - Lo Valdivia P5
• Sequencing Status: Permanent Draft
• Sequencing Center: Lifesequencing S.L.
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 22070040
• Sequencing Scaffolds: 35
• Novel Protein Genes: 35
• Associated Families: 27

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	3
Not Available	10
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2
All Organisms → Viruses → Predicted Viral	12
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pontimonas phage phiPsal1	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → saline evaporation pond → hypersaline water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Hypersaline (saline)

Location Information

• Location: Bras del Port, Santa Pola, Spain
• Coordinates
  • Lat. (^o): 38.192206
  • Long. (^o): -0.591865
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001864	Metagenome	624	Y
F002322	Metagenome / Metatranscriptome	571	Y
F006304	Metagenome / Metatranscriptome	376	Y
F006972	Metagenome / Metatranscriptome	361	Y
F009454	Metagenome	317	Y
F010211	Metagenome / Metatranscriptome	307	N
F013961	Metagenome / Metatranscriptome	267	Y
F022152	Metagenome / Metatranscriptome	215	Y
F031511	Metagenome / Metatranscriptome	182	Y
F032166	Metagenome	180	Y
F035743	Metagenome	171	N
F037490	Metagenome / Metatranscriptome	168	Y
F038111	Metagenome	166	N
F043370	Metagenome / Metatranscriptome	156	Y
F051561	Metagenome / Metatranscriptome	144	N
F061556	Metagenome	131	Y
F062724	Metagenome	130	N
F066262	Metagenome	127	Y
F066493	Metagenome	126	Y
F074590	Metagenome / Metatranscriptome	119	Y
F078533	Metagenome / Metatranscriptome	116	Y
F083416	Metagenome / Metatranscriptome	113	N
F083929	Metagenome	112	N
F088532	Metagenome	109	Y
F091964	Metagenome	107	Y
F098766	Metagenome	103	Y
F099972	Metagenome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
p5metav_100040	All Organisms → cellular organisms → Bacteria	20997
p5metav_100081	Not Available	15095
p5metav_100114	All Organisms → cellular organisms → Bacteria	12689
p5metav_100167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10160
p5metav_100308	Not Available	7207
p5metav_100333	Not Available	6866
p5metav_100442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5846
p5metav_100454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5772
p5metav_100931	All Organisms → Viruses → Predicted Viral	3800
p5metav_100965	All Organisms → Viruses → Predicted Viral	3725
p5metav_101112	All Organisms → Viruses → Predicted Viral	3440
p5metav_101687	All Organisms → Viruses → Predicted Viral	2679
p5metav_101838	All Organisms → cellular organisms → Bacteria	2545
p5metav_102002	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	2403
p5metav_102035	All Organisms → Viruses → Predicted Viral	2386
p5metav_103063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1861
p5metav_103300	Not Available	1775
p5metav_103670	All Organisms → Viruses → Predicted Viral	1657
p5metav_103826	Not Available	1613
p5metav_103897	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1594
p5metav_104321	All Organisms → Viruses → Predicted Viral	1492
p5metav_104436	Not Available	1469
p5metav_104885	All Organisms → Viruses → Predicted Viral	1378
p5metav_105216	All Organisms → Viruses → Predicted Viral	1318
p5metav_105457	All Organisms → Viruses → Predicted Viral	1277
p5metav_105465	All Organisms → Viruses → Predicted Viral	1276
p5metav_105874	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1210
p5metav_105875	All Organisms → Viruses → Predicted Viral	1210
p5metav_106454	Not Available	1131
p5metav_106806	Not Available	1093
p5metav_107483	Not Available	1020
p5metav_107851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	982
p5metav_108682	Not Available	910
p5metav_108960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pontimonas phage phiPsal1	890
p5metav_109438	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	855

Sequences

Scaffold ID	Protein ID	Family	Sequence
p5metav_100040	p5metav_10004022	F013961	MDIATILTRKYSGAEWVLNGDAYSGLTWLSDGDAPSEADLKKLWPVVEKEIAAEAQAKLDAKASAVAKLEALGLTVEEVSVAFGLEA*
p5metav_100081	p5metav_10008112	F006304	MPKKLTAAEKYAQLKAQTEAAGMKVREVDGKIVVERKRKPAKKK*
p5metav_100114	p5metav_1001143	F078533	MTPQQFKEARRYLCLSQRDLADIWGMGRNGERSIRRWEQGDVPVNPIAAYCITLMVGSAAPHDKPA*
p5metav_100167	p5metav_10016713	F031511	VASKIPGGGGEVKLNRKGIGELLRSNEIASELRNRMRRVQAALPGSELEVTTKGRRARAKVARGSDFEEANTGELSRALDLAGGQRGTKVKSRKPRARKAST*
p5metav_100308	p5metav_1003087	F091964	MSKHVRVKLTCEIEFDLEDLNSDVADDIREMCDLDSFEAIENDHIKLYVGEQDVYEMNDQFGIADAEIQEVIVE*
p5metav_100333	p5metav_10033311	F074590	MVVSIRLWHVFGLSVESVEAQPIYGHMPHESEEDAQVFFFDGYIINIPFVKIMIGDVWGIADN*
p5metav_100442	p5metav_10044210	F099972	MPKATTGKRLLNLPQAAEYSAKSYERGLEEGRRQMQAEMLNALEALSAEAKKDLKEQLNDL*
p5metav_100454	p5metav_1004547	F006972	VLCTLACCSLSRRCWRLRLRRARDRVSVGDRIGAGLEPALLSTQMRVEGLADLTKTLRTLDRKALNKLRAEMRGMINPVAKAIGGDVPSQAPLSGMNHNGVTRWTGTVRSSVSFTPGRAKGGASRLLAMKFTGGTRAGGGIGFDYAELAGSSRRPGARFSREYDRAGSPGIQHRINGQGRAFNQGIRAYKPIRGRAGYFAYDSAVKRYPMIEGLGKRAIEKFMADATREIGRFR*
p5metav_100931	p5metav_1009311	F083416	TYVHCRIHVEAYCLIKTPVAIQPAYTIYFERFADRTWTHADVHKWTPDIKKEFMQVHGLLQMMHTEPFYCLTDNPKLEKFVQLLGYEYVQTLSCDDGIDRPMWRYTNG*
p5metav_100965	p5metav_1009653	F038111	MIHRVPVVNKNDYTIWLENYRNIANFIHAEVYNYNKTVRQEFGKDLNVLAKLHNAPLYVLTDKDNKKLKKFMSIYGLVLDHTPLCDDGVEREVYRLDRRV*
p5metav_101112	p5metav_1011123	F002322	VAYDPLPYSKNVEKHILECIQGGVGIREMIASMQHLQGAPKSLSTLYKIYGDVIHAERARINAAVGRKVIDQALKGHFKSQELFLRSKGGWSPKETVETNEGIDEDTDESAVDSLMTLLGKDEEDE*
p5metav_101687	p5metav_1016877	F066493	MSDTEREWTDGVIDVAAELVKRHSADGAIERLQTRRQTTDDELQARCNEAIAWIRREVQGDA*
p5metav_101838	p5metav_1018386	F013961	MDIAKILTRKYEGSEWTLDGDDYAGLTWLSDGEAPTEAELKKLWPKVQADIAAEAQAKIDAKASAIAKLEALGLTVDEVQAAFGLSTDETE*
p5metav_102002	p5metav_1020022	F062724	MGAMKQNDVQFQEAMNLAMTSHNKELADTVAWYRAHFDKLPAELMRAILTDDEFFQKAVTVWDNERFAPKPASEHVALQVPLVSRRDLREPKRVTYRCALVIGLVGAALITGVAVLVVAL
p5metav_102035	p5metav_1020353	F031511	MASKIPGGGGEVKLNSAGIRDLLRSQEIETELRGRMAKVRGALPGSELYVTRSRTRVAVKVKRGSDYDEANTGDLSRALDLAGGRRGTQVKTRKPKRGA*
p5metav_103063	p5metav_1030633	F001864	MTQYRFEIDSNNAIRIWDTLNPNENDAPFMLQPDWPDTTPWESANQAKNWAEVFIESLENNESKFVAGNSPETHPALRPQPEEGK*
p5metav_103300	p5metav_1033004	F013961	MDIAQILTRKFPGQEWTLNGDSFEGLTWLSDGPAPSEAELTGLWPEVEAEIQAEADAKVAAKRSAVAKLEALGLTVEEVSVAFGIEV*
p5metav_103670	p5metav_1036704	F043370	WELNGLPFDLMPRIEAGDVAPHDLREIAAFLRNLNGANIDVSTHPEVIQDLMDIAELNYDPDVSQPTQQQQEATDGEQ*
p5metav_103826	p5metav_1038263	F009454	MPNFEEIEAAILEVQQPRSRFQLERFVIGQHKTEEMQFYQTCIELQDMIYKYQSAKLNVQKQELKIKRLRETGDELKELKAQELELGLKQTYTAMKGAEREMLALTEIFYEFPKRYTREEIEAAQPSYWDERLTGNAKAQLMGGSGVNPAHIEAMEQAGVLDKLIEEVQESKRELGL*
p5metav_103897	p5metav_1038974	F032166	AIELLETPADEWRDLDDGFNEIEEAEELLDFQRRTQGQIDAQGLGENYLTDAQDMTKREAASIRWAIDPDTEREWL*
p5metav_104321	p5metav_1043214	F061556	MYRLATQNKIGEVVQFGPVMSMAIAERKRKAMVALTNYPVYIININAQ*
p5metav_104436	p5metav_1044362	F022152	MSEQPGPKSTQGQLLWQLVQDMAEIKATVKMVIDHEERIRELEKARWQTAWITAFASAALTATAVAVMTQLIG*
p5metav_104885	p5metav_1048852	F037490	MRTWEPLGSIGSPDRLDACVWALTDLSLNGYAKPQLTLAYTSAKGLS*
p5metav_105216	p5metav_1052162	F051561	MSTDFDEEFDLLKALRESQALEMVEETESGWSTKVVPCALSQAAAKEIVQLRQEVNELRNRLAKVKS*
p5metav_105457	p5metav_1054573	F083929	MKALKFTALLLLALVSYPIGIVYGAVVTCFRWATWLLMFDTERIGQSIYLIGVRMSTLLNATAATWLTAWLIVPGSDLKFGEYFPASAIIGKAHQLRHLSKVGQWVRAQLEYLDPGHCERAARRHGLIWK*
p5metav_105465	p5metav_1054652	F022152	MSEQPGPKSTQSQLLWSLVQDMAEIKATVKMVMDHEERIRELEKARWQTAWITAFASAALTAAAVAIVTQMIG*
p5metav_105874	p5metav_1058741	F098766	READGADHVRLDVERVPPERPPETYYFHPRCFERAQDWEAGL*
p5metav_105875	p5metav_1058752	F099972	MPKANTGKRLLNLPQAAEYSSWAYQRGVEHGRREMQAEMMKALEALSAEAKKDLEKKLRDL*
p5metav_106454	p5metav_1064544	F099972	MPKAINGKRLLNLPQAAQYFAWSYQRGVEHGRREMQAEMMKALESLSAEAKEDLEKK
p5metav_106806	p5metav_1068061	F010211	MCLAMNWNDALVNIVGRTPPEDSLELRNSFIESVMTDQDGNKIQQAQLHLTMQEAMYRWEKDAIEKNITMRGMVRAPYNSGKSQQVPIGLSAYMTTRKHELETLIISADSRIAIKRILALRSLFAKDEYKYWCKTHNFDAVELDRTDTGSTQRIIVRSKNDTGNPTFEAHGVFTETAGQRAGVLILDDVCNDEDRVSRAHRENVWSKVSNIWIKRVHDRGIILSVSTPYHQDDANSRLKRSGMFNVLEIAVKEDKSGYECREWFRG*
p5metav_107483	p5metav_1074832	F035743	VEGGQLPRPTSTTVLQILAFFFGTLSEIIKNYPNLFEGGGEESKGDVFGWLGLVDRLAGGRRQEWDAILEMPITEFLNTLAFHTTISKQRQKRLEKAAASGFESYVCACLNELL*
p5metav_107851	p5metav_1078513	F088532	MQAHLKSAQDKENPTTEQETQALAGLLDAGVKAVGLRAVKDAASLLQKLEDATTPKEEMTDD*
p5metav_108682	p5metav_1086822	F066262	MPNFEEIEAAILEVQQPRSRFQLERFVIGQHKTEEMQYYQTCLELQDMIYKYQSAKLNVQKQELKIKRLRETGDEMKELKAQELELGLKQTYIAMQGAEREMLALTEIFYS
p5metav_108960	p5metav_1089602	F013961	MDIAAILSRKFEGSEWTLDGDDYAGLTWLSEGDAPTEAQLKKLWPTVQAEIEAEKQAVIDARLSAISKLEALGLTVDEVQAAFGLKA*
p5metav_109438	p5metav_1094381	F037490	PLGSIGSPDRLDALVWALTDLMLGSYQKPKLQLVYSNAKGLR*