Sample 3300003391

Overview

Basic Information
IMG/M Taxon OID	3300003391 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110179 \| Gp0089074 \| Ga0008476
Sample Name	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	10370287
Sequencing Scaffolds	21
Novel Protein Genes	21
Associated Families	20

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2
All Organisms → cellular organisms → Archaea	9
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
Not Available	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arabidopsis Thaliana Rhizosphere Microbial Communities From The Joint Genome Institute, Usa, That Affect Carbon Cycling
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere → Arabidopsis Thaliana Rhizosphere Microbial Communities From The Joint Genome Institute, Usa, That Affect Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Location Information
Location	Joint Genome Institute, California, USA
Coordinates	Lat. (^o)	37.931388	Long. (^o)	-122.021761	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F005683	Metagenome / Metatranscriptome	393	Y
F005950	Metagenome / Metatranscriptome	385	Y
F007651	Metagenome / Metatranscriptome	347	N
F009776	Metagenome / Metatranscriptome	313	Y
F011965	Metagenome	285	Y
F019548	Metagenome / Metatranscriptome	229	N
F026602	Metagenome / Metatranscriptome	197	N
F041232	Metagenome	160	N
F041299	Metagenome	160	N
F041834	Metagenome	159	Y
F046734	Metagenome / Metatranscriptome	151	N
F050961	Metagenome	144	N
F051312	Metagenome / Metatranscriptome	144	Y
F057659	Metagenome	136	Y
F063100	Metagenome	130	N
F073748	Metagenome	120	N
F073997	Metagenome	120	N
F085441	Metagenome	111	Y
F090038	Metagenome	108	N
F100610	Metagenome	102	N

Family

Category

Number of Sequences

3D Structure?

F005683

Metagenome / Metatranscriptome

393

F005950

Metagenome / Metatranscriptome

385

F007651

Metagenome / Metatranscriptome

347

F009776

Metagenome / Metatranscriptome

313

F011965

Metagenome

285

F019548

Metagenome / Metatranscriptome

229

F026602

Metagenome / Metatranscriptome

197

F041232

Metagenome

160

F041299

Metagenome

160

F041834

Metagenome

159

F046734

Metagenome / Metatranscriptome

151

F050961

Metagenome

144

F051312

Metagenome / Metatranscriptome

144

F057659

Metagenome

136

F063100

Metagenome

130

F073748

Metagenome

120

F073997

Metagenome

120

F085441

Metagenome

111

F090038

Metagenome

108

F100610

Metagenome

102

Scaffold	Taxonomy	Length	IMG/M Link
JGI26135J50243_100244	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1793	Open in IMG/M
JGI26135J50243_100340	All Organisms → cellular organisms → Archaea	1525	Open in IMG/M
JGI26135J50243_100446	All Organisms → cellular organisms → Archaea	1326	Open in IMG/M
JGI26135J50243_100451	All Organisms → cellular organisms → Archaea	1316	Open in IMG/M
JGI26135J50243_100470	All Organisms → cellular organisms → Archaea	1285	Open in IMG/M
JGI26135J50243_100547	All Organisms → cellular organisms → Archaea	1182	Open in IMG/M
JGI26135J50243_100565	All Organisms → cellular organisms → Archaea	1165	Open in IMG/M
JGI26135J50243_100749	All Organisms → cellular organisms → Archaea	973	Open in IMG/M
JGI26135J50243_101052	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	803	Open in IMG/M
JGI26135J50243_101079	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
JGI26135J50243_101173	Not Available	765	Open in IMG/M
JGI26135J50243_101219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	752	Open in IMG/M
JGI26135J50243_101318	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
JGI26135J50243_101638	Not Available	650	Open in IMG/M
JGI26135J50243_101681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
JGI26135J50243_101843	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
JGI26135J50243_102212	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
JGI26135J50243_102485	Not Available	549	Open in IMG/M
JGI26135J50243_102662	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	534	Open in IMG/M
JGI26135J50243_102777	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
JGI26135J50243_102927	Not Available	513	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

JGI26135J50243_100244

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon

1793

Open in IMG/M

JGI26135J50243_100340

All Organisms → cellular organisms → Archaea

1525

Open in IMG/M

JGI26135J50243_100446

All Organisms → cellular organisms → Archaea

1326

Open in IMG/M

JGI26135J50243_100451

All Organisms → cellular organisms → Archaea

1316

Open in IMG/M

JGI26135J50243_100470

All Organisms → cellular organisms → Archaea

1285

Open in IMG/M

JGI26135J50243_100547

All Organisms → cellular organisms → Archaea

1182

Open in IMG/M

JGI26135J50243_100565

All Organisms → cellular organisms → Archaea

1165

Open in IMG/M

JGI26135J50243_100749

All Organisms → cellular organisms → Archaea

973

Open in IMG/M

JGI26135J50243_101052

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon

803

Open in IMG/M

JGI26135J50243_101079

All Organisms → cellular organisms → Bacteria → Proteobacteria

796

Open in IMG/M

JGI26135J50243_101173

Not Available

765

Open in IMG/M

JGI26135J50243_101219

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum

752

Open in IMG/M

JGI26135J50243_101318

All Organisms → cellular organisms → Bacteria

723

Open in IMG/M

JGI26135J50243_101638

Not Available

650

Open in IMG/M

JGI26135J50243_101681

All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium

645

Open in IMG/M

JGI26135J50243_101843

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium

620

Open in IMG/M

JGI26135J50243_102212

All Organisms → cellular organisms → Archaea

576

Open in IMG/M

JGI26135J50243_102485

Not Available

549

Open in IMG/M

JGI26135J50243_102662

All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium

534

Open in IMG/M

JGI26135J50243_102777

All Organisms → cellular organisms → Archaea

525

Open in IMG/M

JGI26135J50243_102927

Not Available

513

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
JGI26135J50243_100244	JGI26135J50243_1002441	F041299	VYSPVFDEIDYRMKSQAKSTLLAIIIPSCIAILLFYIGAYFHPDIFSLLNGLPGVIILSGSVIVVTKLLCYTKLERSEMQKFKPLILGIVCFLIGETFYFYQQYFLQIDIPYPSVADVPYLLASFFFSYFLISCVFSLLDRKNLSPLPIILGSPIAIFPIYVTLSSAYDLAINESTELEFIVNALYYIFDGLMLVTAVIIILNLKKYDPFIFHWICITVGLILLVIGDVGYTYFSIISESLIEEYEWLWSILYAIGYLFLGIGIYWFDRIKNTLEDKKINVFLEKDEMDRLKNSSKNELIADTGTEFSEHIIGYEKFVDKLKDYLERSKEIKILFYDKYWLSDEEVNLILEKIQQGAFFTQIQVNILLPSSETIFKNLVS
JGI26135J50243_100340	JGI26135J50243_1003402	F057659	MNVFWAFVIIILVFVTTLPVVHRVIPSISGANLSCINSNITKFGNQSINLSIMSEEYFKNLTSDNPQLAQLICPDIINYTTK*
JGI26135J50243_100446	JGI26135J50243_1004462	F090038	MPKMAFLSKKLSQELLNLDIDEGIRIESNKNIKCKMYINKRTSGYFVLEIEDTNSTNIKEFRFYRDIKPIHRLIDKIFGKQYSITIY*
JGI26135J50243_100451	JGI26135J50243_1004511	F005683	MEKSNGTKIMGILLVFGLVVYSIYFGQISFVEGVELKTVGKGAISCGNGEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
JGI26135J50243_100470	JGI26135J50243_1004702	F026602	LNNQIIAIGFILISLILASMHVFAGRLYAIEQPSKMEGINEEECNKIFNCKIISEDVLKYPDIVNPFTKNEEIAKTLNANDAXIMTEHTCQKLMDVDIVKKKDQKIGEQAPKYLVCLP*
JGI26135J50243_100547	JGI26135J50243_1005472	F073997	MXSSGIESFALINEVGAQISPSXRLHSLLEQIVRSEVRKVAISLIFPLLEKFNMPIKLV
JGI26135J50243_100565	JGI26135J50243_1005652	F100610	MPVIISLFGNEDMDITEFRLTNKSVFYRCSYGECFRFIADKCMHCFANPIPDTEMHINYLRRVPDIKKAVTDLGI*
JGI26135J50243_100749	JGI26135J50243_1007491	F005950	MTNGKNRIKVKIHRTSDYDDKYTGIRDFPDEKAMLQYGLSKVHKVIIRKYMEDDEFITRAQKTRGIKFDYEMELYD*
JGI26135J50243_101052	JGI26135J50243_1010523	F007651	MLRNHSNYMSNDLNELIARKDKLEGELHHELSSDYNELMKNLSESFRDMHENSVQYYKQKANEELDKMEKNIQSGNXLSAINXKLLADTYLSFATTI*
JGI26135J50243_101079	JGI26135J50243_1010792	F041232	LVAASLLLTYGIALVTFMVRWIRFWMRGEYFLPYLFVFVTTLALLLFWWTSRRPHAPLPILSTIVYSVVAGYVAGLIAMVLYPFFQSDGLQHMIEALRFPTIEAAIAFFWFPIRLLTWLFGGITGVTMLVLSRRWRRMTC*
JGI26135J50243_101173	JGI26135J50243_1011731	F019548	KPPEEQTSVVRDDERKSAIFEINFGTVAGLSMLFECEKALADQVMSLDFLDSGIEGDVIWFGGMLDKSGSEFIGSTYEDGLKSAPVEQSELVHRVNQAIDKCLEYMLNSVELDKNVYVDASNRMSGYVKLTRIGEHIREKHPDLFRDNTKSE*
JGI26135J50243_101219	JGI26135J50243_1012191	F041834	ATVYDKNGIIVATGDKYVNDYLIKPGSRSGFDIFLDETLPSKSKYALTTSFEKSEDDKPEVLQLSVGKNSKSSNTFRVLGEVMNQGKNDANAVKVSAIFYDEKHKVMDTDYVFTNPDIISPNKKAPFEFSFYVDNPEKIKSMAFNVQSDEFSLITDNGQNNTISQQ*
JGI26135J50243_101318	JGI26135J50243_1013182	F050961	VKTKPPKGMPWSAPVLVRKDGKKLAVELPPQVAADLKAGPGDVLNFTKLPEGEIQIWVVKKGGYASLKDMQ*
JGI26135J50243_101638	JGI26135J50243_1016381	F063100	QQMMSAKLVELRKESSIEFSKAEADAARRGEVSASSTAGLRSQVDIHLVKKIIAAAVVLLTELISELQIPFSDSLAGELKDQVKAYVSNEQCEDLHRMNRGGISEQHAARLKEELYVNRSFFLKRADAQIDLFVDSLRRM*
JGI26135J50243_101681	JGI26135J50243_1016811	F051312	MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTSPTAD
JGI26135J50243_101843	JGI26135J50243_1018432	F085441	LFSVTYNAKGXRVNPPXEHQRQLGFEIGLNLQQILFDLKVSRGTWWGYPLHVVADNIRFPFTAVGMRVDLNRGKWHGPNAGNYD*
JGI26135J50243_102212	JGI26135J50243_1022122	F046734	YSVKNAPLDLYVKYRMNEDDSLNVTSQQDTTIGKEKAVRIDGNKNNNASNIRLLEYLLLHNDEPYVIRYIASMDDFERNLPAFELMVKSFTFGTNATDSKQT*
JGI26135J50243_102485	JGI26135J50243_1024851	F019548	KILERFTSQKGGILFILHKSFSSDSKPPEEQISVVRDDERKSAIFEINLGTMAGLSMLCECEKALADQVMSLDFLDSGIEGDVIWFGGMLDKSGSEFIGSTYDDGLKSAPVEQSELVHRVNQAIDKCLEYMLNSVELDKKVYVDASDRMSGYVKLTRIGEHIREIYPDLFIDNNTKSE*
JGI26135J50243_102662	JGI26135J50243_1026621	F011965	LNPNNPSQTKFIDVLNKTINGIVQSDPKWPTSAAGQTIGIHSMYGSAAGTWLDVVFLQQSWGANGDSVFNLATNTWSLVTNSDTRWSGHSSMGNGKYVNGSGSINGMDSRGALLRDPNNLMDATKYSFIMQPPSTAGWYDAEHSSWFNSSTNPQAPVLFSRYNCTAPPGPLTWYGEII
JGI26135J50243_102777	JGI26135J50243_1027771	F009776	MIKQKKLFNKKGDSVEIKQDGKDVTVTVQYTTKVEPTVSAPQGNFNDLISVYERTGF
JGI26135J50243_102927	JGI26135J50243_1029271	F073748	VFEGIAVNNFLLNRRGCVLFTCLIAGLQICLTAPGWSEEVHFGCEYDEEKTHETSTSNSGPERRSTHGEARYTIDWQSKRVQGFSGEYELKFSDAELRIQRKTQNSSGEWLNKASESIIINRYTGEYVFSEKVEGESVKGISRYWYTYKTRKGXCKKIDKSLF*

Scaffold ID

Protein ID

Family

Sequence

JGI26135J50243_100244

JGI26135J50243_1002441

F041299

VYSPVFDEIDYRMKSQAKSTLLAIIIPSCIAILLFYIGAYFHPDIFSLLNGLPGVIILSGSVIVVTKLLCYTKLERSEMQKFKPLILGIVCFLIGETFYFYQQYFLQIDIPYPSVADVPYLLASFFFSYFLISCVFSLLDRKNLSPLPIILGSPIAIFPIYVTLSSAYDLAINESTELEFIVNALYYIFDGLMLVTAVIIILNLKKYDPFIFHWICITVGLILLVIGDVGYTYFSIISESLIEEYEWLWSILYAIGYLFLGIGIYWFDRIKNTLEDKKINVFLEKDEMDRLKNSSKNELIADTGTEFSEHIIGYEKFVDKLKDYLERSKEIKILFYDKYWLSDEEVNLILEKIQQGAFFTQIQVNILLPSSETIFKNLVS

JGI26135J50243_100340

JGI26135J50243_1003402

F057659

MNVFWAFVIIILVFVTTLPVVHRVIPSISGANLSCINSNITKFGNQSINLSIMSEEYFKNLTSDNPQLAQLICPDIINYTTK*

JGI26135J50243_100446

JGI26135J50243_1004462

F090038

MPKMAFLSKKLSQELLNLDIDEGIRIESNKNIKCKMYINKRTSGYFVLEIEDTNSTNIKEFRFYRDIKPIHRLIDKIFGKQYSITIY*

JGI26135J50243_100451

JGI26135J50243_1004511

F005683

MEKSNGTKIMGILLVFGLVVYSIYFGQISFVEGVELKTVGKGAISCGNGEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*

JGI26135J50243_100470

JGI26135J50243_1004702

F026602

LNNQIIAIGFILISLILASMHVFAGRLYAIEQPSKMEGINEEECNKIFNCKIISEDVLKYPDIVNPFTKNEEIAKTLNANDAXIMTEHTCQKLMDVDIVKKKDQKIGEQAPKYLVCLP*

JGI26135J50243_100547

JGI26135J50243_1005472

F073997

MXSSGIESFALINEVGAQISPSXRLHSLLEQIVRSEVRKVAISLIFPLLEKFNMPIKLV

JGI26135J50243_100565

JGI26135J50243_1005652

F100610

MPVIISLFGNEDMDITEFRLTNKSVFYRCSYGECFRFIADKCMHCFANPIPDTEMHINYLRRVPDIKKAVTDLGI*

JGI26135J50243_100749

JGI26135J50243_1007491

F005950

MTNGKNRIKVKIHRTSDYDDKYTGIRDFPDEKAMLQYGLSKVHKVIIRKYMEDDEFITRAQKTRGIKFDYEMELYD*

JGI26135J50243_101052

JGI26135J50243_1010523

F007651

MLRNHSNYMSNDLNELIARKDKLEGELHHELSSDYNELMKNLSESFRDMHENSVQYYKQKANEELDKMEKNIQSGNXLSAINXKLLADTYLSFATTI*

JGI26135J50243_101079

JGI26135J50243_1010792

F041232

LVAASLLLTYGIALVTFMVRWIRFWMRGEYFLPYLFVFVTTLALLLFWWTSRRPHAPLPILSTIVYSVVAGYVAGLIAMVLYPFFQSDGLQHMIEALRFPTIEAAIAFFWFPIRLLTWLFGGITGVTMLVLSRRWRRMTC*

JGI26135J50243_101173

JGI26135J50243_1011731

F019548

KPPEEQTSVVRDDERKSAIFEINFGTVAGLSMLFECEKALADQVMSLDFLDSGIEGDVIWFGGMLDKSGSEFIGSTYEDGLKSAPVEQSELVHRVNQAIDKCLEYMLNSVELDKNVYVDASNRMSGYVKLTRIGEHIREKHPDLFRDNTKSE*

JGI26135J50243_101219

JGI26135J50243_1012191

F041834

ATVYDKNGIIVATGDKYVNDYLIKPGSRSGFDIFLDETLPSKSKYALTTSFEKSEDDKPEVLQLSVGKNSKSSNTFRVLGEVMNQGKNDANAVKVSAIFYDEKHKVMDTDYVFTNPDIISPNKKAPFEFSFYVDNPEKIKSMAFNVQSDEFSLITDNGQNNTISQQ*

JGI26135J50243_101318

JGI26135J50243_1013182

F050961

VKTKPPKGMPWSAPVLVRKDGKKLAVELPPQVAADLKAGPGDVLNFTKLPEGEIQIWVVKKGGYASLKDMQ*

JGI26135J50243_101638

JGI26135J50243_1016381

F063100

QQMMSAKLVELRKESSIEFSKAEADAARRGEVSASSTAGLRSQVDIHLVKKIIAAAVVLLTELISELQIPFSDSLAGELKDQVKAYVSNEQCEDLHRMNRGGISEQHAARLKEELYVNRSFFLKRADAQIDLFVDSLRRM*

JGI26135J50243_101681

JGI26135J50243_1016811

F051312

MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTSPTAD

JGI26135J50243_101843

JGI26135J50243_1018432

F085441

LFSVTYNAKGXRVNPPXEHQRQLGFEIGLNLQQILFDLKVSRGTWWGYPLHVVADNIRFPFTAVGMRVDLNRGKWHGPNAGNYD*

JGI26135J50243_102212

JGI26135J50243_1022122

F046734

YSVKNAPLDLYVKYRMNEDDSLNVTSQQDTTIGKEKAVRIDGNKNNNASNIRLLEYLLLHNDEPYVIRYIASMDDFERNLPAFELMVKSFTFGTNATDSKQT*

JGI26135J50243_102485

JGI26135J50243_1024851

F019548

KILERFTSQKGGILFILHKSFSSDSKPPEEQISVVRDDERKSAIFEINLGTMAGLSMLCECEKALADQVMSLDFLDSGIEGDVIWFGGMLDKSGSEFIGSTYDDGLKSAPVEQSELVHRVNQAIDKCLEYMLNSVELDKKVYVDASDRMSGYVKLTRIGEHIREIYPDLFIDNNTKSE*

JGI26135J50243_102662

JGI26135J50243_1026621

F011965

LNPNNPSQTKFIDVLNKTINGIVQSDPKWPTSAAGQTIGIHSMYGSAAGTWLDVVFLQQSWGANGDSVFNLATNTWSLVTNSDTRWSGHSSMGNGKYVNGSGSINGMDSRGALLRDPNNLMDATKYSFIMQPPSTAGWYDAEHSSWFNSSTNPQAPVLFSRYNCTAPPGPLTWYGEII

JGI26135J50243_102777

JGI26135J50243_1027771

F009776

MIKQKKLFNKKGDSVEIKQDGKDVTVTVQYTTKVEPTVSAPQGNFNDLISVYERTGF

JGI26135J50243_102927

JGI26135J50243_1029271

F073748

VFEGIAVNNFLLNRRGCVLFTCLIAGLQICLTAPGWSEEVHFGCEYDEEKTHETSTSNSGPERRSTHGEARYTIDWQSKRVQGFSGEYELKFSDAELRIQRKTQNSSGEWLNKASESIIINRYTGEYVFSEKVEGESVKGISRYWYTYKTRKGXCKKIDKSLF*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003391: Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences