Sample 3300003380

Overview

Basic Information
IMG/M Taxon OID	3300003380 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110179 \| Gp0089083 \| Ga0008485
Sample Name	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	11532438
Sequencing Scaffolds	21
Novel Protein Genes	22
Associated Families	22

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	15
Not Available	3
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arabidopsis Thaliana Rhizosphere Microbial Communities From The Joint Genome Institute, Usa, That Affect Carbon Cycling
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere → Arabidopsis Thaliana Rhizosphere Microbial Communities From The Joint Genome Institute, Usa, That Affect Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Location Information
Location	Joint Genome Institute, California, USA
Coordinates	Lat. (^o)	37.931388	Long. (^o)	-122.021761	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F005683	Metagenome / Metatranscriptome	393	Y
F006898	Metagenome / Metatranscriptome	362	Y
F007651	Metagenome / Metatranscriptome	347	N
F010272	Metagenome / Metatranscriptome	306	Y
F012397	Metagenome	281	Y
F013352	Metagenome / Metatranscriptome	272	Y
F016471	Metagenome / Metatranscriptome	247	Y
F017423	Metagenome / Metatranscriptome	241	N
F020931	Metagenome / Metatranscriptome	221	Y
F023901	Metagenome / Metatranscriptome	208	N
F032058	Metagenome	181	Y
F050439	Metagenome	145	N
F057496	Metagenome / Metatranscriptome	136	N
F068543	Metagenome	124	Y
F073212	Metagenome / Metatranscriptome	120	Y
F073748	Metagenome	120	N
F083220	Metagenome	113	Y
F086321	Metagenome	111	N
F088429	Metagenome	109	N
F090038	Metagenome	108	N
F098876	Metagenome	103	N
F100610	Metagenome	102	N

Family

Category

Number of Sequences

3D Structure?

F005683

Metagenome / Metatranscriptome

393

F006898

Metagenome / Metatranscriptome

362

F007651

Metagenome / Metatranscriptome

347

F010272

Metagenome / Metatranscriptome

306

F012397

Metagenome

281

F013352

Metagenome / Metatranscriptome

272

F016471

Metagenome / Metatranscriptome

247

F017423

Metagenome / Metatranscriptome

241

F020931

Metagenome / Metatranscriptome

221

F023901

Metagenome / Metatranscriptome

208

F032058

Metagenome

181

F050439

Metagenome

145

F057496

Metagenome / Metatranscriptome

136

F068543

Metagenome

124

F073212

Metagenome / Metatranscriptome

120

F073748

Metagenome

120

F083220

Metagenome

113

F086321

Metagenome

111

F088429

Metagenome

109

F090038

Metagenome

108

F098876

Metagenome

103

F100610

Metagenome

102

Scaffold	Taxonomy	Length	IMG/M Link
JGI26144J50225_100089	All Organisms → cellular organisms → Archaea	4269	Open in IMG/M
JGI26144J50225_100399	All Organisms → cellular organisms → Archaea	1757	Open in IMG/M
JGI26144J50225_100475	All Organisms → cellular organisms → Archaea	1516	Open in IMG/M
JGI26144J50225_100508	All Organisms → cellular organisms → Archaea	1441	Open in IMG/M
JGI26144J50225_100687	All Organisms → cellular organisms → Archaea	1127	Open in IMG/M
JGI26144J50225_100697	All Organisms → cellular organisms → Archaea	1118	Open in IMG/M
JGI26144J50225_100746	All Organisms → cellular organisms → Archaea	1062	Open in IMG/M
JGI26144J50225_100986	All Organisms → cellular organisms → Archaea	877	Open in IMG/M
JGI26144J50225_101287	All Organisms → cellular organisms → Archaea	741	Open in IMG/M
JGI26144J50225_101412	Not Available	708	Open in IMG/M
JGI26144J50225_101570	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	674	Open in IMG/M
JGI26144J50225_101979	All Organisms → cellular organisms → Archaea	605	Open in IMG/M
JGI26144J50225_102022	Not Available	599	Open in IMG/M
JGI26144J50225_102077	All Organisms → cellular organisms → Archaea	591	Open in IMG/M
JGI26144J50225_102188	All Organisms → cellular organisms → Archaea	579	Open in IMG/M
JGI26144J50225_102190	Not Available	578	Open in IMG/M
JGI26144J50225_102210	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
JGI26144J50225_102506	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	547	Open in IMG/M
JGI26144J50225_102784	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
JGI26144J50225_102884	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	516	Open in IMG/M
JGI26144J50225_103058	All Organisms → cellular organisms → Archaea	503	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

JGI26144J50225_100089

All Organisms → cellular organisms → Archaea

4269

Open in IMG/M

JGI26144J50225_100399

All Organisms → cellular organisms → Archaea

1757

Open in IMG/M

JGI26144J50225_100475

All Organisms → cellular organisms → Archaea

1516

Open in IMG/M

JGI26144J50225_100508

All Organisms → cellular organisms → Archaea

1441

Open in IMG/M

JGI26144J50225_100687

All Organisms → cellular organisms → Archaea

1127

Open in IMG/M

JGI26144J50225_100697

All Organisms → cellular organisms → Archaea

1118

Open in IMG/M

JGI26144J50225_100746

All Organisms → cellular organisms → Archaea

1062

Open in IMG/M

JGI26144J50225_100986

All Organisms → cellular organisms → Archaea

877

Open in IMG/M

JGI26144J50225_101287

All Organisms → cellular organisms → Archaea

741

Open in IMG/M

JGI26144J50225_101412

Not Available

708

Open in IMG/M

JGI26144J50225_101570

All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon

674

Open in IMG/M

JGI26144J50225_101979

All Organisms → cellular organisms → Archaea

605

Open in IMG/M

JGI26144J50225_102022

Not Available

599

Open in IMG/M

JGI26144J50225_102077

All Organisms → cellular organisms → Archaea

591

Open in IMG/M

JGI26144J50225_102188

All Organisms → cellular organisms → Archaea

579

Open in IMG/M

JGI26144J50225_102190

Not Available

578

Open in IMG/M

JGI26144J50225_102210

All Organisms → cellular organisms → Archaea

576

Open in IMG/M

JGI26144J50225_102506

All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium

547

Open in IMG/M

JGI26144J50225_102784

All Organisms → cellular organisms → Archaea

524

Open in IMG/M

JGI26144J50225_102884

All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16

516

Open in IMG/M

JGI26144J50225_103058

All Organisms → cellular organisms → Archaea

503

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
JGI26144J50225_100089	JGI26144J50225_1000895	F023901	MKDNCSLKMRSRHNEQGQSCEGGVPLDPNKFGGYEFAINTKGWDAKREPTHNCHDQHKSGLIPTNLENDKAVRLRQTVKDESGKVHQIGEIDYMDGNGFHKVMDIFDSSPNPWMVDRNLYETKSYFWIRNNGSGYITVRDVSLEILS*
JGI26144J50225_100399	JGI26144J50225_1003992	F100610	MPVIISLFGNEDMEITEFPLTNKSVFYRCSYGECFRFIADKCMHCCANPIPDTEMHINYLRRLPDIKKAVTDLGI*
JGI26144J50225_100475	JGI26144J50225_1004751	F005683	MEKSNGTKIMGILLVFGLVVYSIYFGQISFAEGVELKTVGKGAISCGNGEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
JGI26144J50225_100508	JGI26144J50225_1005082	F010272	MYMNHERKLILIAIGAFVTLSLFVFPSTNMIAYSQSENKTQGKEQAQEKLFELAQKFNKILKDSNVNLTLPQNGDLSSKLQELKDSGAFKELSEKFSQAVQELGQGNKTEELKQEAGADLSTLMQKLQSLRNNSTQ*
JGI26144J50225_100571	JGI26144J50225_1005712	F073212	EPGFNIVINANGFTPNGTVAWKFVGSDSKILXYGYFETNSTGGFNDVTFADDLKQDHYKLYFADDVNTDGTFDIGAKRIYSNVTIPCGQ*
JGI26144J50225_100687	JGI26144J50225_1006872	F057496	MAGVYRNHTKVAEDHSSAYCKDEYVFGXKGEPLRLSHLIAFNVIEDAEHISGILTVEFDYYSDDDSIKYRDMHYSNPRLIKHIEGNPTVMKNIDAYLRNNLLESEYGLKL*
JGI26144J50225_100697	JGI26144J50225_1006971	F068543	ESAIDQAGNSLSPGDLITPQKVTYLFSAQASETVQALEEEGPQDYQYECALDDESFNSCNSPMTYELDEGKHDFVVRLVP*
JGI26144J50225_100746	JGI26144J50225_1007462	F013352	MASSTNAQIEVTVDENVSTPISNSTLSEDAEPRPDILYSALNKDTIVGEVLNNFSYPIELVRITATVYDKNGIIVATGDKYVNDYLIKPGSRSGFDIFLDETLPSKSKYALTTSFEKSEDDKPEALQLSVGKNSKSSNTFRVLGEVMNQGKNDANAVKVSAIFYDEKHKVMDTDYVFTNPDIISPNKKAPFEFSFYVDNPEKIKSMAFNVQSDEFSLITDNGQNNTISQQ
JGI26144J50225_100986	JGI26144J50225_1009861	F088429	QPETNASLNVPEPQPETNASLNVPEPQPETNASDIITPRSIDLNITVGKDPIARSENQMVTVVALDPTTGKVLDRVFIKLEIKDPVGILVKNYTGTVGNLTRTFKIGENAIGTFIISATASQAGVQSTKSLPFQVQ*
JGI26144J50225_101287	JGI26144J50225_1012871	F006898	MYLILTTTLLLFSLFSLPGAFGAEMFKGLSFSIDIPNTWAYTETPEAPIERALGVSSYTSVVLVPVQFAELLIQEKGDIGMGNGSTAIVFAKASDYSVKNAPLDLYVKYRMNEDDSLNVTSQQDTTIGKEKAVRIDGNKNNNASNIRLLEYLLLHNDEPYVIRYIASMDDFE
JGI26144J50225_101412	JGI26144J50225_1014121	F050439	MLYDVLHVTEGWGPLQAVEISITLLYCIDFFYLQSDLGSDQLPQGNWRDTMLDAAIAVVFGAAYWQASDRKLFTCYALLAVAGALIVAYHFTPNRRFLWAILPHSVLTVLFVSLAWLARGLENVTWTFAVVSWFPTIWYGTYVFWLAHRILPSGK*
JGI26144J50225_101570	JGI26144J50225_1015703	F007651	MSNDLNELIARKDKLEGELHLELSSDYNELMKNLSESFRDMHENSVQYYKQKANEELDKMEKNIQSGNKLSAINQ
JGI26144J50225_101979	JGI26144J50225_1019791	F012397	KLRSVGYVSVRIKRNKNNKKGVRWNRILILIVLVTTLSLLSGPSLSFSEIKNEINVTPPLNWEPSPTNNSTTMIWFQNYTKSIFAITKAPDDLVFPLFIAGPFMTGYLKYKGVLESADRLTFGHSNYGYRYFLNLSSPSKLLDSSSGLIPKNEFLSKIPEGYDVPFKGMLIXTQKHXELYAIIFLNPKEKFDSMLNQIQPT
JGI26144J50225_102022	JGI26144J50225_1020221	F086321	MNPSKKEIYKILERFTSQKGGILIILHNSFSSDSKPPQEQTSVVRDDERKSAIFEINFGTVAGLSMLCECEKALADQVMSLDFLDSG
JGI26144J50225_102077	JGI26144J50225_1020771	F020931	LSPRFGFFKRKTPDYFHDKESQANSVHSVSNKELLEIVENEKKVLQKDLIDNLEPTRNLVLDCLNRLRKNADELEEQEIKAESPQFESLINTSKKILITSIKKESLIESYQIKSYEDAIKFKNNLELLINRFGQVGDSHNRILNEFMRKQINKLKSE
JGI26144J50225_102188	JGI26144J50225_1021881	F016471	MTEADKFGAVKDATVAIGLANKDTKDVISSFGTGFFIGGEYIVSSAHIFSQCIKYNAQNKDKNKGMEGIYSAFNITTNGDQLELNTYHMNNGMEGIYSAFNITTNGDQLELNTYHIIKAIRLPPVKEVTGFTGSVDLDIGIGKLDRHSDNF
JGI26144J50225_102190	JGI26144J50225_1021901	F073748	VNNFLLNLRGCVLFTCLIAGLQICLTAPGWSEEVHFGCEYDEEKTHETSTSNSGPERRSTHGEARYTIDWQSKRVQGFSGEYELKFSDAELRIQRKTQNSSGEWLNKASESIIINRYTGEYVFSEKVEGESVKGISRYWYTYKTRKGICKKIDKSLF*
JGI26144J50225_102210	JGI26144J50225_1022101	F090038	MAFLSKKLSQELLNLDIDEGIRIESNKNIKCKMYINKRTSGYFVLEIEDTNSTNIKEFRFYRDIKPIYRLIDKIFGKQYSITIY*
JGI26144J50225_102506	JGI26144J50225_1025061	F083220	YNKSTHVVTNLGGRGVSLKYHVVVVGLDAWVCAAGPGTQNTYRQIFCLNPRNPSQTKFIDILKRTINGVYQSDPNWPTSAPYQTIGIHAMYGSATGTWLDVGFHRASWGAGGDSVFNLSTNKWSLLKANRYSSGHSSIGTRFVNGSGSINGMYSGGACVRNPSNLMDATRYTFIMQPPSA
JGI26144J50225_102784	JGI26144J50225_1027841	F017423	EKYQIAFQYPSDWTIKEKSNKLEEGTEIDVSNKKIGDGKIGIHFYDDLLEGFGSTDLEFAFSDFYKHRITDDLKFEYKTIQPPSLLEIDGHKTGSFHIMFSQKDEIDPISGEVQYWITFVGENGYMIEFLSIPENFDTPDNTEMRDRFISSINFLGLSNTTDTSGRISSVAMSY
JGI26144J50225_102884	JGI26144J50225_1028841	F032058	MSPEQSPGQGTLIVAALIVLGIVFAGHWIVSYVQSSNPWAIIPWYGVAAVLIIV
JGI26144J50225_103058	JGI26144J50225_1030582	F098876	ESKDVNSSVHIQSQIVAGKNPSIEFSLHLKLTHESRYPNIKFSSSGEKISVQEDRLMTKDEVSQDMIPEYYDKELITEEFVKEXLIRXIKSXFDKDWQSFYS*

Scaffold ID

Protein ID

Family

Sequence

JGI26144J50225_100089

JGI26144J50225_1000895

F023901

MKDNCSLKMRSRHNEQGQSCEGGVPLDPNKFGGYEFAINTKGWDAKREPTHNCHDQHKSGLIPTNLENDKAVRLRQTVKDESGKVHQIGEIDYMDGNGFHKVMDIFDSSPNPWMVDRNLYETKSYFWIRNNGSGYITVRDVSLEILS*

JGI26144J50225_100399

JGI26144J50225_1003992

F100610

MPVIISLFGNEDMEITEFPLTNKSVFYRCSYGECFRFIADKCMHCCANPIPDTEMHINYLRRLPDIKKAVTDLGI*

JGI26144J50225_100475

JGI26144J50225_1004751

F005683

MEKSNGTKIMGILLVFGLVVYSIYFGQISFAEGVELKTVGKGAISCGNGEEVKGVRINFFVSYDEETPFAEWNMDHKELGSAGGETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*

JGI26144J50225_100508

JGI26144J50225_1005082

F010272

MYMNHERKLILIAIGAFVTLSLFVFPSTNMIAYSQSENKTQGKEQAQEKLFELAQKFNKILKDSNVNLTLPQNGDLSSKLQELKDSGAFKELSEKFSQAVQELGQGNKTEELKQEAGADLSTLMQKLQSLRNNSTQ*

JGI26144J50225_100571

JGI26144J50225_1005712

F073212

EPGFNIVINANGFTPNGTVAWKFVGSDSKILXYGYFETNSTGGFNDVTFADDLKQDHYKLYFADDVNTDGTFDIGAKRIYSNVTIPCGQ*

JGI26144J50225_100687

JGI26144J50225_1006872

F057496

MAGVYRNHTKVAEDHSSAYCKDEYVFGXKGEPLRLSHLIAFNVIEDAEHISGILTVEFDYYSDDDSIKYRDMHYSNPRLIKHIEGNPTVMKNIDAYLRNNLLESEYGLKL*

JGI26144J50225_100697

JGI26144J50225_1006971

F068543

ESAIDQAGNSLSPGDLITPQKVTYLFSAQASETVQALEEEGPQDYQYECALDDESFNSCNSPMTYELDEGKHDFVVRLVP*

JGI26144J50225_100746

JGI26144J50225_1007462

F013352

MASSTNAQIEVTVDENVSTPISNSTLSEDAEPRPDILYSALNKDTIVGEVLNNFSYPIELVRITATVYDKNGIIVATGDKYVNDYLIKPGSRSGFDIFLDETLPSKSKYALTTSFEKSEDDKPEALQLSVGKNSKSSNTFRVLGEVMNQGKNDANAVKVSAIFYDEKHKVMDTDYVFTNPDIISPNKKAPFEFSFYVDNPEKIKSMAFNVQSDEFSLITDNGQNNTISQQ

JGI26144J50225_100986

JGI26144J50225_1009861

F088429

QPETNASLNVPEPQPETNASLNVPEPQPETNASDIITPRSIDLNITVGKDPIARSENQMVTVVALDPTTGKVLDRVFIKLEIKDPVGILVKNYTGTVGNLTRTFKIGENAIGTFIISATASQAGVQSTKSLPFQVQ*

JGI26144J50225_101287

JGI26144J50225_1012871

F006898

MYLILTTTLLLFSLFSLPGAFGAEMFKGLSFSIDIPNTWAYTETPEAPIERALGVSSYTSVVLVPVQFAELLIQEKGDIGMGNGSTAIVFAKASDYSVKNAPLDLYVKYRMNEDDSLNVTSQQDTTIGKEKAVRIDGNKNNNASNIRLLEYLLLHNDEPYVIRYIASMDDFE

JGI26144J50225_101412

JGI26144J50225_1014121

F050439

MLYDVLHVTEGWGPLQAVEISITLLYCIDFFYLQSDLGSDQLPQGNWRDTMLDAAIAVVFGAAYWQASDRKLFTCYALLAVAGALIVAYHFTPNRRFLWAILPHSVLTVLFVSLAWLARGLENVTWTFAVVSWFPTIWYGTYVFWLAHRILPSGK*

JGI26144J50225_101570

JGI26144J50225_1015703

F007651

MSNDLNELIARKDKLEGELHLELSSDYNELMKNLSESFRDMHENSVQYYKQKANEELDKMEKNIQSGNKLSAINQ

JGI26144J50225_101979

JGI26144J50225_1019791

F012397

KLRSVGYVSVRIKRNKNNKKGVRWNRILILIVLVTTLSLLSGPSLSFSEIKNEINVTPPLNWEPSPTNNSTTMIWFQNYTKSIFAITKAPDDLVFPLFIAGPFMTGYLKYKGVLESADRLTFGHSNYGYRYFLNLSSPSKLLDSSSGLIPKNEFLSKIPEGYDVPFKGMLIXTQKHXELYAIIFLNPKEKFDSMLNQIQPT

JGI26144J50225_102022

JGI26144J50225_1020221

F086321

MNPSKKEIYKILERFTSQKGGILIILHNSFSSDSKPPQEQTSVVRDDERKSAIFEINFGTVAGLSMLCECEKALADQVMSLDFLDSG

JGI26144J50225_102077

JGI26144J50225_1020771

F020931

LSPRFGFFKRKTPDYFHDKESQANSVHSVSNKELLEIVENEKKVLQKDLIDNLEPTRNLVLDCLNRLRKNADELEEQEIKAESPQFESLINTSKKILITSIKKESLIESYQIKSYEDAIKFKNNLELLINRFGQVGDSHNRILNEFMRKQINKLKSE

JGI26144J50225_102188

JGI26144J50225_1021881

F016471

MTEADKFGAVKDATVAIGLANKDTKDVISSFGTGFFIGGEYIVSSAHIFSQCIKYNAQNKDKNKGMEGIYSAFNITTNGDQLELNTYHMNNGMEGIYSAFNITTNGDQLELNTYHIIKAIRLPPVKEVTGFTGSVDLDIGIGKLDRHSDNF

JGI26144J50225_102190

JGI26144J50225_1021901

F073748

VNNFLLNLRGCVLFTCLIAGLQICLTAPGWSEEVHFGCEYDEEKTHETSTSNSGPERRSTHGEARYTIDWQSKRVQGFSGEYELKFSDAELRIQRKTQNSSGEWLNKASESIIINRYTGEYVFSEKVEGESVKGISRYWYTYKTRKGICKKIDKSLF*

JGI26144J50225_102210

JGI26144J50225_1022101

F090038

MAFLSKKLSQELLNLDIDEGIRIESNKNIKCKMYINKRTSGYFVLEIEDTNSTNIKEFRFYRDIKPIYRLIDKIFGKQYSITIY*

JGI26144J50225_102506

JGI26144J50225_1025061

F083220

YNKSTHVVTNLGGRGVSLKYHVVVVGLDAWVCAAGPGTQNTYRQIFCLNPRNPSQTKFIDILKRTINGVYQSDPNWPTSAPYQTIGIHAMYGSATGTWLDVGFHRASWGAGGDSVFNLSTNKWSLLKANRYSSGHSSIGTRFVNGSGSINGMYSGGACVRNPSNLMDATRYTFIMQPPSA

JGI26144J50225_102784

JGI26144J50225_1027841

F017423

EKYQIAFQYPSDWTIKEKSNKLEEGTEIDVSNKKIGDGKIGIHFYDDLLEGFGSTDLEFAFSDFYKHRITDDLKFEYKTIQPPSLLEIDGHKTGSFHIMFSQKDEIDPISGEVQYWITFVGENGYMIEFLSIPENFDTPDNTEMRDRFISSINFLGLSNTTDTSGRISSVAMSY

JGI26144J50225_102884

JGI26144J50225_1028841

F032058

MSPEQSPGQGTLIVAALIVLGIVFAGHWIVSYVQSSNPWAIIPWYGVAAVLIIV

JGI26144J50225_103058

JGI26144J50225_1030582

F098876

ESKDVNSSVHIQSQIVAGKNPSIEFSLHLKLTHESRYPNIKFSSSGEKISVQEDRLMTKDEVSQDMIPEYYDKELITEEFVKEXLIRXIKSXFDKDWQSFYS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003380: Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences