3300002151: Host-associated microbial community of the marine sponge Aplysina aerophoba from Gulf of Piran - sponge mesohyl, lysed by proteinase K digestion

Overview

Basic Information

• IMG/M Taxon OID: 3300002151
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0099546 | Gp0055082 | Ga0005349
• Sample Name: Host-associated microbial community of the marine sponge Aplysina aerophoba from Gulf of Piran - sponge mesohyl, lysed by proteinase K digestion
• Sequencing Status: Permanent Draft
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 298689615
• Sequencing Scaffolds: 6
• Novel Protein Genes: 6
• Associated Families: 6

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Host-Associated Microbial Community Of The Marine Sponge Aplysina Aerophoba From Gulf Of Piran, Adriatic Sea
• Type: Host-Associated
• Taxonomy: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Host-Associated → Host-Associated Microbial Community Of The Marine Sponge Aplysina Aerophoba From Gulf Of Piran, Adriatic Sea

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal corpus

Location Information

• Location: Gulf of Piran, Adriatic Sea
• Coordinates
  • Lat. (^o): 45.5099
  • Long. (^o): 13.56
  • Alt. (m): N/A
  • Depth (m): 5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002359	Metagenome / Metatranscriptome	567	Y
F003590	Metagenome / Metatranscriptome	478	Y
F017881	Metagenome / Metatranscriptome	238	Y
F027335	Metagenome / Metatranscriptome	195	Y
F054214	Metagenome / Metatranscriptome	140	Y
F105625	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
JGI24794J26673_10022933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1744
JGI24794J26673_10027609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1470
JGI24794J26673_10027746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1464
JGI24794J26673_10049662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900
JGI24794J26673_10086693	All Organisms → cellular organisms → Bacteria	609
JGI24794J26673_10091606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI24794J26673_10022933	JGI24794J26673_100229334	F003590	LGSHLTATYDGTRLYGMQFRAGDPPGRCHFPWGRCGVFNGGGKADGEVYLSCVQGVAGELPAPMKWVVKDSEVVEAEGGELAEECRQLFKNVPGSNRLVEIMFGYHPKASIQHGIADPMHWELISKMPWVGLGTDRKNPDFRHVDGSVMNARLYIDERLIVHEQGMLDRSLLHHPEVLEAASAYGDPYQVLAPVSHNAHGSGTLW*
JGI24794J26673_10027609	JGI24794J26673_100276092	F002359	MIDYDIADMMDGVKNMIEASDIRPGDQVLLLADRRSDSASMEAISAGLKFMGAEPMSLITEPISRYGRVPQAVLDAMHACDVVIWVWPVFITFTPGHRALGRKREESGTQLKEQRMKPYFIYFEGTPGLLARDYARFPNPVLWKLAEKVREVVAAGKVVRIEDDLGSHLTATYDGTRLYGMQFRAGDP
JGI24794J26673_10027746	JGI24794J26673_100277461	F017881	MALFFHSQDVDELVPFPEAVSITENALRRIGTPEGVNAPRKRLNLHRTVAEAPFDTVLNIYAGGSSSYGAVGAQVALHRKAIVGDQQRRPPYNPDQTELALVYDADTGTLLGIMAHRPKH
JGI24794J26673_10049662	JGI24794J26673_100496621	F027335	PPEYELALEENMIVALEINHHPVKLEHLLRVTADGAEILSTYPMEPELAPA*
JGI24794J26673_10086693	JGI24794J26673_100866931	F105625	MSGVGTTHEDLEKYLAGHHLTGAGLRREGMAPPRTGATGAHWRWQGIYQGLLRSGEIV
JGI24794J26673_10091606	JGI24794J26673_100916062	F054214	LIKKTIAGEIHVSVYGAGGTGEPLVANVQHLGCAEGKHGVSNVTRYCTPELEKLVTQYMEEPDRAKRLAIWKKFAKTYFVDDVVHYIVGWSNIRNYVWRDEVKNWERGPTQEYWHAKGGLWRTWLEPK*