3300000970: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY66

Overview

Basic Information

• IMG/M Taxon OID: 3300000970
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0085351 | Gp0056515 | Ga0011746
• Sample Name: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY66
• Sequencing Status: Permanent Draft
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 653523679
• Sequencing Scaffolds: 4
• Novel Protein Genes: 4
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Macroalgal Surface Microbial Communities
• Type: Host-Associated
• Taxonomy: Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Surface (saline)

Location Information

• Location: Botany Bay, Sydney, NSW, Australia
• Coordinates
  • Lat. (^o): -33.966629
  • Long. (^o): 151.166614
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003009	Metagenome / Metatranscriptome	513	Y
F023215	Metagenome / Metatranscriptome	211	Y
F028441	Metagenome / Metatranscriptome	191	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
BBAY66_10001596	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	16232
BBAY66_10001795	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	14767
BBAY66_10079049	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	737
BBAY66_11966336	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1982

Sequences

Scaffold ID	Protein ID	Family	Sequence
BBAY66_10001596	BBAY66_100015966	F028441	MTLKQLIKLENKAKEVWVVSPTLHYDTENKDFSELVSVNLGQKTKYRYIVPATSTVIKNINNYKKIYGVTEKEINKNFLILPESEFNPFLEETAIYNATTKPIACVAPATEEGNDVIKFCEETSKRMTKAFKALWKKYKRTNP*
BBAY66_10001795	BBAY66_1000179515	F028441	MTLKQLIKLENKAKEVWVVSPTLHYDIENKDFSEIVSVNLGEKTKYRYIVPGTRLVEKNIKAYKKMYNVTEAEIATNFLILPVSEFNPFLEETAIYNATSDCIACCAPATENSNDVIKFNQDTSKAMAKAYKALWKKYKRTNP*
BBAY66_10079049	BBAY66_100790491	F023215	MKFSKDLLELRDKENKLVKMKRYEEAEKIKMKADLLE*
BBAY66_11966336	BBAY66_119663366	F003009	MKIPFQNYYKQNLRNITKYFIILSVKYHFLSAIFGFFIILTIVSQLISGTMLAFSLIPEPMLIPIIRDEEDLEDLYTDDFF*