NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 2209111013

2209111013: Subtropical soil microbial communities from Bundaberg Australia-rainforest



Overview

Basic Information
IMG/M Taxon OID2209111013 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0050527 | Gp0053156 | Ga0011303
Sample NameSubtropical soil microbial communities from Bundaberg Australia-rainforest
Sequencing StatusPermanent Draft
Sequencing CenterAustralian Genome Research Facility
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size24947263
Sequencing Scaffolds34
Novel Protein Genes40
Associated Families23

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available28
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSubtropical Soil Microbial Communities From Bundaberg Australia
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Subtropical Soil → Subtropical Soil Microbial Communities From Bundaberg Australia

Alternative Ecosystem Assignments
Environment Ontology (ENVO)terrestrial biomelandsand
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Soil (non-saline)

Location Information
LocationAustrailia: Bundaberg, Queensland
CoordinatesLat. (o)-24.867Long. (o)152.351Alt. (m)N/ADepth (m)0 to .03
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

Associated Scaffolds

Sequences


 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.