2077657002: Sulfur spring sediment and crust microbial communities from Zodletone, Oklahoma, USA - B4

Overview

Basic Information

• IMG/M Taxon OID: 2077657002
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0046169 | Gp0051732 | Ga0011067
• Sample Name: Sulfur spring sediment and crust microbial communities from Zodletone, Oklahoma, USA - B4
• Sequencing Status: Permanent Draft
• Sequencing Center: Mogene LC
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 39726144
• Sequencing Scaffolds: 8
• Novel Protein Genes: 8
• Associated Families: 3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albidoflavus group → Streptomyces albidoflavus	1
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Sulfur Spring Sediment And Crust Microbial Communities From Zodletone, Oklahoma, Usa
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Thermal Springs → Warm (34-42C) → Sediment → Sulfur Spring Sediment And Crust → Sulfur Spring Sediment And Crust Microbial Communities From Zodletone, Oklahoma, Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): aquatic biome → sulfur spring → sediment
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Surface (non-saline)

Location Information

• Location: Southwest Oklahoma
• Coordinates
  • Lat. (^o): 35.100293
  • Long. (^o): -98.749601
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F010686	Metagenome / Metatranscriptome	300	Y
F035850	Metagenome / Metatranscriptome	171	Y
F037503	Metagenome / Metatranscriptome	168	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
ZODLETONE_B4_GLDH0LQ04H87K5	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	518
ZODLETONE_B4_GLDH0LQ04H9ZK8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albidoflavus group → Streptomyces albidoflavus	555
ZODLETONE_B4_GLDH0LQ04I0XXW	All Organisms → cellular organisms → Bacteria	551
ZODLETONE_B4_GLDH0LQ04IHLL7	All Organisms → cellular organisms → Bacteria	506
ZODLETONE_B4_GLDH0LQ04IJFS9	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	509
ZODLETONE_B4_GLDH0LQ04IN6FP	All Organisms → cellular organisms → Bacteria	537
ZODLETONE_B4_GLDH0LQ04IVCA6	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	560
ZODLETONE_B4_GLDH0LQ04JHAC5	All Organisms → cellular organisms → Bacteria	527

Sequences

Scaffold ID	Protein ID	Family	Sequence
ZODLETONE_B4_GLDH0LQ04H87K5	ZODLETONE_00951030	F037503	CSLVVSLAEVELLIRLEGFTAYQPLTNSEYCKIYTGVSPRVLRSVDKRERTQTIS
ZODLETONE_B4_GLDH0LQ04H9ZK8	ZODLETONE_00912930	F035850	G*LGDPMLPRKASREVLAARTLTDSGGQVENTKAIERIVVKELGKI
ZODLETONE_B4_GLDH0LQ04I0XXW	ZODLETONE_00133710	F037503	MSVVEVELLIRLEGFTAYQTLTNSECYDIYSGVSPWVLRSVARGKEPRLSA
ZODLETONE_B4_GLDH0LQ04IHLL7	ZODLETONE_00521790	F037503	SSVEESLIEVELPIGLGGVTSYQILMNSECYQIYSAVRAWVLRSKSERERTQTIS
ZODLETONE_B4_GLDH0LQ04IJFS9	ZODLETONE_01059590	F037503	MMEVELPIGLGGVKSYQILTNSECHHIEPAVRAWVLRSKSERERTQTFR
ZODLETONE_B4_GLDH0LQ04IN6FP	ZODLETONE_00210970	F037503	TTRELPIGLGGVTSYRILTNSECHLTYAAVRRGVLRSRAERERTQTVS
ZODLETONE_B4_GLDH0LQ04IVCA6	ZODLETONE_00070900	F010686	VTLKKGARGMSWRRKAMKGVEGCEKPGRAVKQALIPGFPNDSVPN
ZODLETONE_B4_GLDH0LQ04JHAC5	ZODLETONE_00939830	F037503	MEVELPIGLGGFTAYQTLMNSEFHGTATTVRLWVLMSIAERGTTQTNS