Scaffold Ga0369856_117995

Overview

Basic Information

• Taxon OID: 3300033157
• Scaffold ID: Ga0369856_117995
• Source Dataset Name: Human adult male fecal microbial communities from Ikoma, Japan - F1-S
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: The University of Tokyo
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1137
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Adult Male Fecal → Human Fecal Microbial Communities From Ikoma, Japan

Source Dataset Sampling Location

• Location Name: Japan: Ikoma
• Coordinates
  • Lat. (^o): 34.7321
  • Long. (^o): 135.7306

Associated Families

Family	Category	Number of Sequences	3D Structure?
F092227	Metagenome	107	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0369856_1179952	F092227	AGGAGG	MKEEKRKRILRVGCLILAGIFVLSMLGSVVMMLLV