3300033157: Human adult male fecal microbial communities from Ikoma, Japan - F1-S

Overview

Basic Information

• IMG/M Taxon OID: 3300033157
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0141816 | Gp0395101 | Ga0369856
• Sample Name: Human adult male fecal microbial communities from Ikoma, Japan - F1-S
• Sequencing Status: Permanent Draft
• Sequencing Center: The University of Tokyo
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 38008638
• Sequencing Scaffolds: 2
• Novel Protein Genes: 2
• Associated Families: 2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Human Fecal Microbial Communities From Ikoma, Japan
• Type: Host-Associated
• Taxonomy: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Adult Male Fecal → Human Fecal Microbial Communities From Ikoma, Japan

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Unclassified

Location Information

• Location: Japan: Ikoma
• Coordinates
  • Lat. (^o): 34.7321
  • Long. (^o): 135.7306
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F078693	Metagenome	116	N
F092227	Metagenome	107	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0369856_100940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3254
Ga0369856_117995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1137

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0369856_100940	Ga0369856_1009403	F078693	MVFAPMRGAERFFIKADCSLLMSKENQKSTSDFDALDPRERGYSPLSDPEGVVEAQKC
Ga0369856_117995	Ga0369856_1179952	F092227	MKEEKRKRILRVGCLILAGIFVLSMLGSVVMMLLV