Basic Information | |
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Taxon OID | 3300029930 Open in IMG/M |
Scaffold ID | Ga0119944_1000067 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Hong Kong |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 15722 |
Total Scaffold Genes | 32 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 28 (87.50%) |
Novel Protein Genes | 5 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 5 (100.00%) |
Associated Families | 5 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China |
Source Dataset Sampling Location | ||||||||
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Location Name | China: Pearl River Delta area | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | .5 | Location on Map | ||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F017816 | Metagenome | 238 | Y |
F022866 | Metagenome | 212 | Y |
F063491 | Metagenome | 129 | Y |
F069436 | Metagenome | 124 | Y |
F075836 | Metagenome | 118 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0119944_100006712 | F063491 | AGGAGG | MTTENPYPPPAPLVLADMCAVHAWSDQLDDQSRKLLEWAADTIRCVVRMNARLSHDKEQLEGDNAHLFMLHYGPQKGGAA |
Ga0119944_100006714 | F017816 | GGCGG | MAPTLIAITGVIYLAVAADLSYSGRYGLAIAYAGYAAANVGLYLAAKG |
Ga0119944_100006725 | F075836 | GAGG | MLVAFAGCIATLPSDPSLTADLACEAARAVLASKGTPEDDTKPKPGDTCPNCDGRGYVGDGVVKVECQPCGGTGKVKATATATSPSCPDGRCRL |
Ga0119944_100006727 | F069436 | GAG | MTDAAKDTMFGILERWGFPTLVALGLAFFIRQDLLMPLLEEHRLTLKEVRETQREIADAVADQTRLLIAIQSGKPLPPLRTVDVAEPDHGKN |
Ga0119944_10000675 | F022866 | AGGAGG | MRRTIDRLLPALVLVRLGQELGTASPVTRAIHDLLDLLATVAGVFRG |
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