Scaffold Ga0247319_1000077

Overview

Basic Information

• Taxon OID: 3300029904
• Scaffold ID: Ga0247319_1000077
• Source Dataset Name: Fecal microbial communities from Lean line chicken in Harbin, China - MGJ1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Inner Mongolia Agricultural University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 98224
• Total Scaffold Genes: 170
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 61 (35.88%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Birds → Digestive System → Fecal → Unclassified → Fecal → Fecal Microbial Communities From Lean And Fat Line Chickens In Harbin, China

Source Dataset Sampling Location

• Location Name: China: Harbin
• Coordinates
  • Lat. (^o): 45.73
  • Long. (^o): 126.73

Associated Families

Family	Category	Number of Sequences	3D Structure?
F053097	Metagenome / Metatranscriptome	141	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0247319_1000077150	F053097	N/A	MFDIKGDKIVFSTQDLAIPPFKDFYNNAKDKNLAKKQLEYVVWRYKWNTPYEAYPENERSERVALDVFGAKYEPDASVKELIKRFNEF