Scaffold Ga0134619_1068177

Overview

Basic Information

• Taxon OID: 3300029826
• Scaffold ID: Ga0134619_1068177
• Source Dataset Name: Marine sediment microbial communities from Jimmy Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - N0247
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Battelle Memorial Institute
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 774
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment → Marine Sediment Microbial Communities From New Orleans, Usa To Study Impact Of Deep Water Horizon Explosion

Source Dataset Sampling Location

• Location Name: USA: Bay Jimmy
• Coordinates
  • Lat. (^o): 29.44
  • Long. (^o): -89.903
  • Depth (m): .02 to .04

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025653	Metagenome / Metatranscriptome	200	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0134619_10681772	F025653	GGA	MSDPIKYFETQLKNLCLAELQAYKKRLDESITQKIAQTAPNEQIAPLILYRGIVEHEMKTRMGQK