Scaffold Ga0245176_100156

Overview

Basic Information

• Taxon OID: 3300029733
• Scaffold ID: Ga0245176_100156
• Source Dataset Name: Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37172
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 111466
• Total Scaffold Genes: 114
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 47 (41.23%)
• Novel Protein Genes: 11
• Novel Protein Genes with Ribosome Binding Sites (RBS): 5 (45.45%)
• Associated Families: 11

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae (Source: IMG-VR)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Twins In The Twinsuk Registry In London, United Kingdom

Source Dataset Sampling Location

• Location Name: United Kingdom: London
• Coordinates
  • Lat. (^o): 51.5
  • Long. (^o): -0.12

Associated Families

Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F075481	Metagenome	119	N
F077313	Metagenome	117	N
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F089592	Metagenome	109	N
F102167	Metagenome	102	N
F106193	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0245176_10015610	F102167	N/A	MDINQIKKYLPAGWDVVDLIDHGIIDLDIMNGKMMGEYVAMLMIRSCEKATKSYTLTSFSFHDKDMDKLRMLIGNAIMAVGYRNNPLTGDGNTTIK
Ga0245176_10015624	F058555	N/A	MGTKIGILHIMKSNFDKIITERYTPRNIQVKKDELGCVKLPAGSLICPVDFKPVTNKEGKKVTAIKYSLKHEEYHGSGIQISDECKMAMIYLIIINVFKHVFLRNRMHGGNRDQIEINTNDFIDILSDGCAYFCYRHVLRDSHEDMNYQLISLKAWAEGEIMIALSDIIKYKHRASKTPRIKDMFVKKGESVYTCLDKNIDSNTRRWMANKSRKLNRVKMLSKIIFSARNRNINKIYKVTKKRTIKFNVSYLMDRLNIKLSKEGMMLISQRTVYRMIKEVLSMCCKTISDLYDEVKKNNGIVNTKDRKNVTIGHLRLSYRGTIMHIIIAEDFIKDVFLGVKGVEMSKAG
Ga0245176_10015636	F089592	N/A	MKDILKSKEVLVEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKAPFPENATHVCCPWDDFSEVYNTGFYPRSRCYNGMDKDEVDKLVDQRVNNIMKPFENISQKDLSQTNFEFWDDAKDKIYMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPIFMNSMFCFIEKDNAKDFVQQREINKMNISYKFIDALKKGGKERQAVIDLLLYIGIVTRPDFTEDDYYTGSLSNWMNEKKTNIDYLLDIWDRSLEGDFKEVLEFYRIVNVLQRNGRINMTPSGLQYNGQIIGPDTRTSAEFLATKKDLISVKANVLDEYEELMSISDIDDKTKKVKDVKKKEDVGEGDKVNTEE
Ga0245176_10015637	F089591	GGAGG	MTIQEAYLRSLQKNEQNLANGGIKLDPGRFVLLFNEAQDRLIRYYLNRKDDETIRSIQTLLVYWESLNKINHIDDPESTSFGLPDDYLWFSNIKGAFSYNGCEVGDFVIWEAKNENVHELLGDDNNKPSFDYRETFYTIGDGKVVVYEDGFRTDEVRMTYYRNPVRVDLAGYINAAGERSTDIDPELPDPLVEEILDMVAKQFNLNENELSRYRMDKDNVASFK
Ga0245176_10015643	F042095	N/A	MAKTLYKYEASSNKFVWFTTWDRALRNHYTDDYNYVPDPVVGNPYNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGEDNYRIIFRSLAIQHKKNPNTTWWFRKEDGSQYVPVDNHAYADGRRDVQRAVSIDFTCDIYYANIQVCKMTSFPIVDIPGLEFLVVSHTLYVNDGIPVDKLSRSKKLIYIDLQNIGQRMTVIPEAITSKTEVYCLNMFNMLDLRDIESSGIRNIKNMKNLQTLELSSCYLDRYIKEFNDLPKLTSLNITPAPSDMWNYFDINTLPFFEVDKINPNITNFDFLNDWMNGERRTGWNDDNMSGRGLEHLTSFIAANSNSLRMDKLPDYIYEMRAITRFNVNASTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGKRNQFYSLSVSMYNAVYPTENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0245176_10015646	F089590	AGTAGG	MKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLIVLLIVLIANFLARLAQSIRGWKLRRSRRRRFSFKRWFREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILTVTKYGVYIALVGYVMLFLNTIGDAFSDAYLVKVFKAVFKRINVFKMFGFSKNIPDEMFDDIKKIADDKVKDKS
Ga0245176_10015647	F075481	AGAAG	MIRLRISLRAIFCLGLSLFLSSCGSRRQVSEASIDSRLISRIETMINEVIDRKVVEIKTSDLNADIVITEREFDTDKDVDPATGERPVSSQTDTHIVIGRRDSTVTADSLGIDKTITGVKDIDKKTDIKHKDVDDKKESRWPIAITSISVLLILLVLIYLLKKMKVL
Ga0245176_10015654	F106193	AGGCGG	MRSLIVSESFLRWLLIAWIVKYKNIVMGCNTCKEKALKAERERIERSMMNRVSSTVISDREYASKSTAGCMVMLDPLKIMERDVVSIYKQTRTIGDVGIVYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRSKHIKP
Ga0245176_10015672	F064725	AGAAG	VIQLAREGRLDFFCITDSNTYLCAKDLNMTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLICEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITERIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSHERMWPNAFDKYIKLI
Ga0245176_10015681	F077313	N/A	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPAPVNPLGIYSLDTPDQLRTKYANAFDQDNVFPASFKGSLQRIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGAYDIGSRFTQMGRGIGRMRSEGYGDLSTGAKTANTITTIASGISGIMGLARNVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEDQANVEVEKGEYVEQPGEAPMEAMGQKHADGGTPVSLEQGTEVITDDTIIEPDFAKYIRDTYGIKATPKDTYATLMDRYKVKIGLKSAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPVAYDAYMGASEGARARALQDAIYGQTSSWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGRYINEVEQGNVAQRAWADNVNARTWADTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRRLYPAQEVTKGKKG
Ga0245176_10015684	F050794	N/A	MAPVGTLYIMQLDAFLHRKIMQDLRIQRVKVLMMLYTSNYFVNVRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDVLLPTDDDNANIIIEHNGIIKKLMKEAEKLELDTDAIKAMMRDLLDELKDDIDLNILIFDVSQLLIKYNLFRLEAITEQEFKNSFVRMDSRNMEIKKLTLSDIKKVVMMMEDRYDYALYMTEEYN