Scaffold Ga0244796_100450

Overview

Basic Information

• Taxon OID: 3300029501
• Scaffold ID: Ga0244796_100450
• Source Dataset Name: Human fecal microbial communities from Shanghai Jiao Tong University, China - RSZAXPI005363-20
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Genomics Institute (BGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 33039
• Total Scaffold Genes: 55
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (18.18%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Shanghai Jiao Tong University, China

Source Dataset Sampling Location

• Location Name: China: Shanghai
• Coordinates
  • Lat. (^o): 31.2123446
  • Long. (^o): 121.4684853

Associated Families

Family	Category	Number of Sequences	3D Structure?
F044555	Metagenome / Metatranscriptome	154	N
F064817	Metagenome	128	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0244796_1004501	F044555	N/A	MKTTNPSSRITISQNGNQILSCKVYKEPNYILSMSNEEILELISGLDYIGNLPMVPDLGKPIEIQVSTTRQIPLEQNKEVQTKIKEIIYNNLYDTLIDELKDTISRFQAQYNIQEINPYLQDILQNPEDLVSHSQHHKR
Ga0244796_1004509	F064817	N/A	MNIKNLFNRFRKREPELSYSLNLIYLEDTKVVFNQNIQCAKDLENYLSAYMRLFGMYSDKPYVLIYQEYKNRYWVYDKEPYLLYYKVPLIVNLSRKLSGKSDMVITKEKYQAAKDLVPAHEVSDRFKIPEYITGVFTDIWYKCQGYMDTDHVSLEEILELMQHNWLKEFELLVFKRNYDTDMLFLTHSLTYILDQTEEEGRRICIQNIIERNINQENQDENETV