Basic Information | |
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Taxon OID | 3300026863 Open in IMG/M |
Scaffold ID | Ga0209902_102680 Open in IMG/M |
Source Dataset Name | Cyanobacterial communities from the Joint Genome Institute, California, USA - FECB-27 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4665 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 6 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | (Source: IMG/M) |
Source Dataset Ecosystem |
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Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Cyanobacterial → Cyanobacterial Communities From The Joint Genome Institute, California, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: California | |||||||
Coordinates | Lat. (o) | 37.9313884 | Long. (o) | -122.0239394 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F098177 | Metagenome / Metatranscriptome | 104 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209902_1026807 | F098177 | AGGA | MSNENQKPVAPTTKVDTAKTPSAPQQNQGDAKPSTEKPTVQQK |
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