Scaffold Ga0256614_1470145

Overview

Basic Information

• Taxon OID: 3300023201
• Scaffold ID: Ga0256614_1470145
• Source Dataset Name: Activated sludge enriched bacterial communities from WWTP in Fort Collins, Colorado, USA ? PN
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Argonne National Laboratory
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 2520
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Ppcp Degradation By Aerobic Enrichment Cultures (Carbon Source)

Source Dataset Sampling Location

• Location Name: Fort Collins, Colorado, USA
• Coordinates
  • Lat. (^o): 40.585258
  • Long. (^o): -105.084419

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006745	Metagenome	365	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0256614_14701452	F006745	AGG	MRTSAKARRTSSAVVLYVIILVAFQVFLITVAVEAFQTDTESLAWATAAVSVALFAAAAAFLRYLRP