Scaffold Ga0212120_1012765

Overview

Basic Information

• Taxon OID: 3300022544
• Scaffold ID: Ga0212120_1012765
• Source Dataset Name: Jinze_combined assembly
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2608
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring → Bacterial And Archaeal Communities From Various Locations To Study Microbial Dark Matter (Phase Ii)

Source Dataset Sampling Location

• Location Name: Baoshan, Yunnan, China
• Coordinates
  • Lat. (^o): 25.4413
  • Long. (^o): 98.46

Associated Families

Family	Category	Number of Sequences	3D Structure?
F020112	Metagenome	226	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0212120_10127652	F020112	N/A	MEKEAPKTRIKGELQMISRAFRKCVELVEEMLGRGYRLQIPSTEVERLIKIGVGADKRTVQKYMRMLTEDLGFLKTAAKNPLGVVIYRIDVEAIEQFVGEHLKDKLRQLKLSDIRLEQNSIEKEVKTEKI