Scaffold Ga0211639_10031422

Overview

Basic Information

• Taxon OID: 3300020435
• Scaffold ID: Ga0211639_10031422
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2391
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (85.71%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_111
• Coordinates
  • Lat. (^o): -16.9727
  • Long. (^o): -100.6633
  • Depth (m): 350

Associated Families

Family	Category	Number of Sequences	3D Structure?
F095328	Metagenome	105	N
F104975	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211639_100314224	F104975	AGGAGG	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0211639_100314225	F095328	AGG	MKTIVAQYDYERMVTGKLTGEKLKITVKPRHSFGYLQGVTVHINGKKYPSKRNFVYAHNKNNRAILRALIEGGYTENYQWFLHDIQDNQEAAGSEFNQEAKKL