Metagenome Family F104975

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104975
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	60 residues
Representative Sequence	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR
Number of Associated Samples	55
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	89.00 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (86.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.62% β-sheet: 3.12% Coil/Unstructured: 56.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF07275	ArdA	14.00
PF06067	DUF932	11.00
PF10263	SprT-like	4.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG4734	Antirestriction protein ArdA	Defense mechanisms [V]	14.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
All Organisms	root	All Organisms	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Viruses	superkingdom	All Organisms → Viruses	16.00 %
cellular organisms	root	All Organisms → cellular organisms	9.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.00 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	7.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.00 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	7.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.00 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	7.00 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.00 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.00 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.00 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.00 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.00 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.00 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.00 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.00 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	7.00 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.00 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.00 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001740\|JGI24656J20076_1007184	Not Available	1585	Open in IMG/M
3300002484\|JGI25129J35166_1052294	Not Available	785	Open in IMG/M
3300002484\|JGI25129J35166_1056543	Not Available	745	Open in IMG/M
3300002514\|JGI25133J35611_10151694	Not Available	636	Open in IMG/M
3300002514\|JGI25133J35611_10176778	Not Available	571	Open in IMG/M
3300002518\|JGI25134J35505_10017778	Not Available	2217	Open in IMG/M
3300002518\|JGI25134J35505_10037866	Not Available	1293	Open in IMG/M
3300002518\|JGI25134J35505_10063837	Not Available	882	Open in IMG/M
3300002519\|JGI25130J35507_1009587	All Organisms → Viruses → Predicted Viral	2465	Open in IMG/M
3300002519\|JGI25130J35507_1034431	Not Available	1072	Open in IMG/M
3300005398\|Ga0066858_10026823	All Organisms → Viruses → Predicted Viral	1716	Open in IMG/M
3300005408\|Ga0066848_10058851	All Organisms → Viruses → Predicted Viral	1057	Open in IMG/M
3300005422\|Ga0066829_10211379	Not Available	570	Open in IMG/M
3300005423\|Ga0066828_10035845	Not Available	1831	Open in IMG/M
3300005423\|Ga0066828_10209268	Not Available	643	Open in IMG/M
3300005424\|Ga0066826_10031481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2120	Open in IMG/M
3300005426\|Ga0066847_10015688	Not Available	2466	Open in IMG/M
3300005426\|Ga0066847_10085017	Not Available	993	Open in IMG/M
3300005509\|Ga0066827_10296799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	549	Open in IMG/M
3300005516\|Ga0066831_10020133	Not Available	1821	Open in IMG/M
3300005592\|Ga0066838_10197369	Not Available	563	Open in IMG/M
3300005595\|Ga0066833_10236880	Not Available	502	Open in IMG/M
3300005604\|Ga0066852_10017567	All Organisms → Viruses → Predicted Viral	2842	Open in IMG/M
3300006090\|Ga0082015_1002177	Not Available	3450	Open in IMG/M
3300006090\|Ga0082015_1015131	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1319	Open in IMG/M
3300006090\|Ga0082015_1034488	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	828	Open in IMG/M
3300006093\|Ga0082019_1020045	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1282	Open in IMG/M
3300006736\|Ga0098033_1067778	Not Available	1034	Open in IMG/M
3300006736\|Ga0098033_1094260	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	854	Open in IMG/M
3300006736\|Ga0098033_1095475	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	847	Open in IMG/M
3300006736\|Ga0098033_1098580	Not Available	832	Open in IMG/M
3300006736\|Ga0098033_1109150	Not Available	785	Open in IMG/M
3300006736\|Ga0098033_1167382	Not Available	613	Open in IMG/M
3300006736\|Ga0098033_1191762	Not Available	567	Open in IMG/M
3300006736\|Ga0098033_1229160	Not Available	509	Open in IMG/M
3300006738\|Ga0098035_1054036	Not Available	1462	Open in IMG/M
3300006738\|Ga0098035_1167305	Not Available	742	Open in IMG/M
3300006738\|Ga0098035_1186213	Not Available	696	Open in IMG/M
3300006750\|Ga0098058_1149720	Not Available	617	Open in IMG/M
3300006750\|Ga0098058_1171288	Not Available	570	Open in IMG/M
3300006751\|Ga0098040_1142706	Not Available	710	Open in IMG/M
3300006751\|Ga0098040_1148302	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300006753\|Ga0098039_1147196	Not Available	805	Open in IMG/M
3300006753\|Ga0098039_1165872	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300006753\|Ga0098039_1303163	Not Available	533	Open in IMG/M
3300006754\|Ga0098044_1248144	Not Available	690	Open in IMG/M
3300006926\|Ga0098057_1150822	Not Available	567	Open in IMG/M
3300008050\|Ga0098052_1344025	Not Available	559	Open in IMG/M
3300010151\|Ga0098061_1287391	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	567	Open in IMG/M
3300010153\|Ga0098059_1226695	Not Available	724	Open in IMG/M
3300017702\|Ga0181374_1011580	Not Available	1600	Open in IMG/M
3300017703\|Ga0181367_1012617	Not Available	1551	Open in IMG/M
3300017703\|Ga0181367_1043158	Not Available	800	Open in IMG/M
3300017704\|Ga0181371_1006067	Not Available	2135	Open in IMG/M
3300020361\|Ga0211531_1126491	Not Available	682	Open in IMG/M
3300020364\|Ga0211538_1029100	All Organisms → Viruses → Predicted Viral	1819	Open in IMG/M
3300020435\|Ga0211639_10031422	Not Available	2391	Open in IMG/M
3300022225\|Ga0187833_10014790	Not Available	6378	Open in IMG/M
3300022225\|Ga0187833_10019038	Not Available	5413	Open in IMG/M
3300022225\|Ga0187833_10157624	Not Available	1377	Open in IMG/M
3300022227\|Ga0187827_10005748	Not Available	14529	Open in IMG/M
3300022227\|Ga0187827_10168280	Not Available	1524	Open in IMG/M
3300022227\|Ga0187827_10229372	Not Available	1240	Open in IMG/M
3300022227\|Ga0187827_10262483	Not Available	1132	Open in IMG/M
3300022227\|Ga0187827_10647843	Not Available	608	Open in IMG/M
3300025066\|Ga0208012_1001756	Not Available	5563	Open in IMG/M
3300025072\|Ga0208920_1002648	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4384	Open in IMG/M
3300025072\|Ga0208920_1009966	Not Available	2149	Open in IMG/M
3300025072\|Ga0208920_1012763	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1863	Open in IMG/M
3300025072\|Ga0208920_1037808	Not Available	991	Open in IMG/M
3300025072\|Ga0208920_1083427	Not Available	602	Open in IMG/M
3300025072\|Ga0208920_1093992	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	555	Open in IMG/M
3300025078\|Ga0208668_1015985	Not Available	1564	Open in IMG/M
3300025078\|Ga0208668_1023582	Not Available	1232	Open in IMG/M
3300025078\|Ga0208668_1024416	Not Available	1206	Open in IMG/M
3300025078\|Ga0208668_1029944	Not Available	1065	Open in IMG/M
3300025078\|Ga0208668_1035004	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	971	Open in IMG/M
3300025078\|Ga0208668_1049375	Not Available	782	Open in IMG/M
3300025082\|Ga0208156_1036605	Not Available	1032	Open in IMG/M
3300025096\|Ga0208011_1015587	Not Available	2020	Open in IMG/M
3300025097\|Ga0208010_1011889	Not Available	2240	Open in IMG/M
3300025097\|Ga0208010_1105389	Not Available	577	Open in IMG/M
3300025109\|Ga0208553_1068631	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	854	Open in IMG/M
3300025112\|Ga0209349_1007480	Not Available	4485	Open in IMG/M
3300025112\|Ga0209349_1053854	Not Available	1247	Open in IMG/M
3300025122\|Ga0209434_1132156	Not Available	690	Open in IMG/M
3300025131\|Ga0209128_1025547	All Organisms → Viruses → Predicted Viral	2484	Open in IMG/M
3300025141\|Ga0209756_1185545	Not Available	808	Open in IMG/M
3300025268\|Ga0207894_1029981	Not Available	972	Open in IMG/M
3300025268\|Ga0207894_1092062	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026188\|Ga0208274_1073441	Not Available	836	Open in IMG/M
3300026192\|Ga0207986_1020113	Not Available	1843	Open in IMG/M
3300026192\|Ga0207986_1103511	Not Available	613	Open in IMG/M
3300026204\|Ga0208521_1010147	All Organisms → Viruses → Predicted Viral	3306	Open in IMG/M
3300026204\|Ga0208521_1057495	Not Available	1116	Open in IMG/M
3300026208\|Ga0208640_1027142	All Organisms → Viruses → Predicted Viral	1530	Open in IMG/M
3300026208\|Ga0208640_1131687	Not Available	501	Open in IMG/M
3300026259\|Ga0208896_1013586	All Organisms → Viruses → Predicted Viral	2933	Open in IMG/M
3300026261\|Ga0208524_1151502	Not Available	583	Open in IMG/M
3300026279\|Ga0208411_1031869	Not Available	1822	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	97.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	97.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	86.00%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	8.00%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001740	Marine viral communities from the Deep Pacific Ocean - MSP-114	Environmental	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005516	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026204	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026279	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24656J20076_10071844	3300001740	Deep Ocean	MTKIYDLVDEFNSWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDRNNIINPGDRLR*
JGI25129J35166_10522943	3300002484	Marine	MKIYDLVDEFNRWDLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQN
JGI25129J35166_10565433	3300002484	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQN
JGI25133J35611_101516942	3300002514	Marine	MTKIYDLVDEFNSWNLLPSSAEVDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR*
JGI25133J35611_101767782	3300002514	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSI
JGI25134J35505_100177785	3300002518	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIIXPGDRLR*
JGI25134J35505_100378663	3300002518	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDRNNIINPGDRLR*
JGI25134J35505_100638371	3300002518	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR*
JGI25130J35507_10095873	3300002519	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDRNNIINPGDRLR*
JGI25130J35507_10344313	3300002519	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNNIINPGARLS*
Ga0066858_100268232	3300005398	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDRNNIINPGDRLR*
Ga0066848_100588511	3300005408	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR*
Ga0066829_102113792	3300005422	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNYIINPGARLS*
Ga0066828_100358452	3300005423	Marine	VTKIYDLVDEFNRWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDPGDRLR*
Ga0066828_102092683	3300005423	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNII*
Ga0066826_100314815	3300005424	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDRNNIINPGDRLR*
Ga0066847_100156882	3300005426	Marine	MKIYDLVDEFNRWDLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQNDRNYIINPGARLS*
Ga0066847_100850173	3300005426	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQNDRNNII*
Ga0066827_102967992	3300005509	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDPGDRLR*
Ga0066831_100201335	3300005516	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDGNNIIDPGDRLR*
Ga0066838_101973693	3300005592	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNYIINPGARLS*
Ga0066833_102368801	3300005595	Marine	YDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR
Ga0066852_100175672	3300005604	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR*
Ga0082015_10021772	3300006090	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDPGDRLR*
Ga0082015_10151314	3300006090	Marine	MTKIYDLVDEFNSWHLLPSSAEIDDVYLDPYFDEDEDIENKLRQLRSIQNDRNNII*
Ga0082015_10344883	3300006090	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDTENKLQQLRSIQNDRNNII*
Ga0082019_10200453	3300006093	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNII*
Ga0098033_10677783	3300006736	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLAPYFDEDEDIENKLRQLRSIQNDGNNIINPGARLP*
Ga0098033_10942603	3300006736	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDGNNIINPGARLS*
Ga0098033_10954751	3300006736	Marine	MTKIYDLIDEFNSWHLLPSSAEIDDVYLDPYFDEDEDIENKLRQLRSIQNDRNNII*
Ga0098033_10985802	3300006736	Marine	MTKIYDLIDEFNSWHLLPSSAEVDDVYLDPYFDEDEDMENKLRQLRSIQNDRNNII*
Ga0098033_11091502	3300006736	Marine	MKIYDLVDEFNRWNLLPSSAEFDDVYLDPYFDEDEDMENKLRQLRSIQNDRNNII*
Ga0098033_11673823	3300006736	Marine	FNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDRNNIINPGDRLR*
Ga0098033_11917622	3300006736	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDRNNIINPGDRLR*
Ga0098033_12291601	3300006736	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDIENKLRQLRSIQDDRNNIINPGDRLR*
Ga0098035_10540364	3300006738	Marine	MKIYDLVDEFNHWNLLPSSAEFDDDVYLAPYFDEDEDMENKLQQLRSIQNDRNNII*
Ga0098035_11673052	3300006738	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDR
Ga0098035_11862133	3300006738	Marine	MKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDTENKLQQLRSIQNDRNNII*
Ga0098058_11497202	3300006750	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDIENKLRQLRSIQNDRNNIINP
Ga0098058_11712882	3300006750	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQ
Ga0098040_11427061	3300006751	Marine	MKIYDLVDEFNHWNLLPSSAEFDDDVYLAPYFDEDEDIENKLRQLRSIQNDRNNIINPGDRLR*
Ga0098040_11483022	3300006751	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDRNNIIDPGDRLR*
Ga0098039_11471961	3300006753	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDIENKLRQLRSIQNDRNNIINPGDRLR*
Ga0098039_11658721	3300006753	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDRNNIIDP
Ga0098039_13031632	3300006753	Marine	MKIYDLVDEFNSWHLLPSSAEVDDVYLDPYFDEDEDIENKLRQLRSIQNDRNNIINPGARLP*
Ga0098044_12481442	3300006754	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDRNNII*
Ga0098057_11508222	3300006926	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIINPGDRLR*
Ga0098052_13440251	3300008050	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDP
Ga0098061_12873913	3300010151	Marine	LLIIGDDIMTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDRNNII*
Ga0098059_12266953	3300010153	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQ
Ga0181374_10115803	3300017702	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDRNNIINPGDRLR
Ga0181367_10126174	3300017703	Marine	TKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDPGDRLR
Ga0181367_10431582	3300017703	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLAPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0181371_10060677	3300017704	Marine	FNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIINPGDRLR
Ga0211531_11264911	3300020361	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNNIINL
Ga0211538_10291003	3300020364	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNNIINPGARLS
Ga0211639_100314224	3300020435	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0187833_100147909	3300022225	Seawater	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNNIINPGARLS
Ga0187833_1001903810	3300022225	Seawater	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNYIINPGARLS
Ga0187833_101576243	3300022225	Seawater	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDRNNIINPGDRLR
Ga0187827_1000574813	3300022227	Seawater	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDRNNIINPGDRLR
Ga0187827_101682804	3300022227	Seawater	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0187827_102293725	3300022227	Seawater	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNN
Ga0187827_102624833	3300022227	Seawater	MKIYDLVDEFNRWDLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQNDRNYIINPGARLS
Ga0187827_106478432	3300022227	Seawater	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDGNNIIDPGDRLR
Ga0208012_10017563	3300025066	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDPGDRLR
Ga0208920_10026483	3300025072	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDGNNIINPGARLS
Ga0208920_10099663	3300025072	Marine	MKIYDLVDEFNHWNLLPSSAEFDDDVYLAPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0208920_10127634	3300025072	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNNIIDPGDRLR
Ga0208920_10378084	3300025072	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLAPYFDEDEDIENKLRQLRSIQNDRNNIINPGDRLR
Ga0208920_10834273	3300025072	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNI
Ga0208920_10939922	3300025072	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0208668_10159852	3300025078	Marine	MKIYDLVDEFNSWNLLPSSAEFDNDIYLYPYFDEDEDIENKLRQLRSIQNDRNNIINPGDRLR
Ga0208668_10235823	3300025078	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDIENKLRQLRSIQDDRNNIINPGDRLR
Ga0208668_10244163	3300025078	Marine	MTKIYDLIDEFNSWHLLPSSAEVDDVYLDPYFDEDEDMENKLRQLRSIQNDRNNII
Ga0208668_10299443	3300025078	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDGNN
Ga0208668_10350043	3300025078	Marine	MTKIYDLIDEFNSWHLLPSSAEIDDVYLDPYFDEDEDIENKLRQLRSIQNDRNNII
Ga0208668_10493753	3300025078	Marine	MKIYDLVDEFNRWNLLPSSAEFDDVYLDPYFDEDEDMENKLRQLRSIQNDRNNII
Ga0208156_10366053	3300025082	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLAPYFDEDEDIENKLRQLRSIQNDGNNIINPGARLP
Ga0208011_10155872	3300025096	Marine	MTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDRNNIIDPGDRLR
Ga0208010_10118892	3300025097	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDIENKLRQLRSIQNDRNNIINPGDRLR
Ga0208010_11053892	3300025097	Marine	VTKIYDLVDEFNHWNLLPSSAELLADDVYLNPYFDEDEDIENKLRQLRSIQNDRNNIINPGDRLW
Ga0208553_10686313	3300025109	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDVYLAPYFDEDEDIENKLRQLRSIQNDRNNII
Ga0209349_10074808	3300025112	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0209349_10538545	3300025112	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0209434_11321563	3300025122	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQND
Ga0209128_10255478	3300025131	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPGDRLR
Ga0209756_11855454	3300025141	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDRNNIINPGARLS
Ga0207894_10299813	3300025268	Deep Ocean	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0207894_10920621	3300025268	Deep Ocean	MTKIYDLVDEFNSWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQNDRNNIINPGDRLW
Ga0208274_10734412	3300026188	Marine	MTKIYDLVDEFNSWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNYIINPGARLS
Ga0207986_10201131	3300026192	Marine	PGGKEIMTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNNIINPGARLS
Ga0207986_11035112	3300026192	Marine	MTKIYDLVDEFNSWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDR
Ga0208521_10101474	3300026204	Marine	VTKIYDLVDEFNRWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDRNNIINPGDRLR
Ga0208521_10574953	3300026204	Marine	MKIYDLVDEFNRWDLLPSSAEFDDDIYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0208640_10271424	3300026208	Marine	EFNHWNLLPSSAELLADDVYLNPYFDEDEDMENKLRQLRSIQDDRNNIINPGDRLR
Ga0208640_11316872	3300026208	Marine	MTKIYDLVDEFNRWNLLPSSAEFDDDIYLDPYFDEDEDMENKLQQLRSIQNDGNNIINP
Ga0208896_10135861	3300026259	Marine	MTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNIINPSARLP
Ga0208524_11515024	3300026261	Marine	RPVGDNIMTKIYDLVDEFNHWNLLPSSAEFDDDVYLYPYFDEDEDMENKLQQLRSIQNDRNNII
Ga0208411_10318691	3300026279	Marine	LVDEFNHWNLLPSSAELLADDVYLNPYFDEEEDMENKLRQLRSIQNDRNNIINPGDRLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104975

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences