Scaffold Ga0134526_1000104

Overview

Basic Information

• Taxon OID: 3300014961
• Scaffold ID: Ga0134526_1000104
• Source Dataset Name: Wastewater microbial communities from medical facility sewage samples near Freiburg, Germany - C1747
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Freiburg
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 53892
• Total Scaffold Genes: 48
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 43 (89.58%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Medical Facility Sewage Samples Near Freiburg, Germany

Source Dataset Sampling Location

• Location Name: Germany: Freiburg
• Coordinates
  • Lat. (^o): 48.0
  • Long. (^o): 8.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F087336	Metagenome	110	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0134526_100010438	F087336	GAGG	MVAELEQVPKAFKAAGNQRRAAAKERIKDDAIGHGRVSDRILAEIEDNHMRERDTKIGLAEQRQVAFLEIAFQILPLKSKQKRAP*