Scaffold Ga0135352_112838

Overview

Basic Information

• Taxon OID: 3300014357
• Scaffold ID: Ga0135352_112838
• Source Dataset Name: Human colon tissue microbial communities from Howard University Cancer Center, USA - CC0929
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: HiThru Analytics LLC
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 592
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Mammalia → Theria → Eutheria → Boreoeutheria → Laurasiatheria → Artiodactyla → Ruminantia → Pecora → Bovidae → Bovinae → Bos → Bos indicus x Bos taurus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Unclassified → Human Colon Tissue → Human Fecal And Colon Tissue Microbial Communities From Howard University Cancer Center, Usa

Source Dataset Sampling Location

• Location Name: USA: Washington, D.C
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001445	Metagenome	692	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0135352_1128382	F001445	N/A	HFHALEKEMATHSSVLAWRIPGTGEPGGLPSMGSHRVGHD*