Scaffold Ga0116840_1015131

Overview

Basic Information

• Taxon OID: 3300013748
• Scaffold ID: Ga0116840_1015131
• Source Dataset Name: Oral microbial communities from fossilized dental plaque from Dalheim, Germany - S4-Shot-B61-calc
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Oklahoma
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 754
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Oral Cavity → Unclassified → Fossilized Dental Plaque → Oral Microbial Communities From Fossilized Dental Plaque From Dalheim, Germany

Source Dataset Sampling Location

• Location Name: Germany: Dalheim
• Coordinates
  • Lat. (^o): 51.565093
  • Long. (^o): 8.849015

Associated Families

Family	Category	Number of Sequences	3D Structure?
F033081	Metagenome	178	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0116840_10151311	F033081	AGG	MAWLFRRVMPQNTRPTFVWPKLAVEIGNAGYFGRRWLTAVAAVLIAMTIAAVKALLLIPGLDSSVVNLLTRGFATFLPRGWATGTAWTVGVAGVFLIGDFTNYTKQQKFLHSLKATGCGVYDTLLLFALMEEQAFRSGSEKWSWRERARASVCFGLLHITNIWYSLAAGIALSMTGFGFLLVYLWYYRKYRSQVVAT