Scaffold Ga0116841_1022012

Overview

Basic Information

• Taxon OID: 3300013745
• Scaffold ID: Ga0116841_1022012
• Source Dataset Name: Oral microbial communities from fossilized dental plaque from Dalheim, Germany - S5-Shot-G12-calc
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Oklahoma
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 552
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Oral Cavity → Unclassified → Fossilized Dental Plaque → Oral Microbial Communities From Fossilized Dental Plaque From Dalheim, Germany

Source Dataset Sampling Location

• Location Name: Germany: Dalheim
• Coordinates
  • Lat. (^o): 51.565093
  • Long. (^o): 8.849015

Associated Families

Family	Category	Number of Sequences	3D Structure?
F054111	Metagenome	140	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0116841_10220122	F054111	N/A	MNKSLESITHEEFLKLMERLKNLQELTFLEYIMAPEADIFYFNFMEKTVKIKWDLDYGLFLETESLSTADRDLFLNIFLIKRFSFGRRNYNIPT*