Scaffold Ga0153698

Basic Information
Taxon OID	3300011335 Open in IMG/M
Scaffold ID	Ga0153698_1669 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011335 Open in IMG/M

Scaffold ID

Ga0153698_1669 Open in IMG/M

Source Dataset Name

Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	13497
Total Scaffold Genes	23 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	18 (78.26%)
Novel Protein Genes	6 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	4 (66.67%)
Associated Families	6

Scaffold Components

Scaffold Length (bps)

13497

Total Scaffold Genes

23 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

18 (78.26%)

Novel Protein Genes

6 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

4 (66.67%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Hwacheon, Gangwon-do, South Korea
Coordinates	Lat. (^o)	38.0874861	Long. (^o)	127.761456	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Hwacheon, Gangwon-do, South Korea

Coordinates

Lat. (^o)

38.0874861

Long. (^o)

127.761456

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F010821	Metagenome	298	Y
F025978	Metagenome	199	Y
F032630	Metagenome	179	Y
F061661	Metagenome	131	Y
F091603	Metagenome	107	Y
F103126	Metagenome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0153698_16691	F032630	N/A	DNIITEINRGMAATAPGVKVPGSDTFKNMSMGNLIGKIFSESLASNTTLRTMTRPLDFLYKLPDEKLQQLLVEAMLDPQLAAVMMSKANMMKVEPLATSLRQKAIQLGMGTAIGAGQ*
Ga0153698_166911	F103126	GAG	MQKEIDAVVDELSPQPGQIGILTTHELRAHLRMAATKGTLIGWAAAEKLTSARYKQDYDNLSQHCKQLELEIMELKR*
Ga0153698_166912	F061661	AGGAG	MRYREHYTIQPIIRKWAEIALAVAIGVGLAILFFMGA*
Ga0153698_166913	F010821	AGGAGG	MTDFTFSPADFSATTITVVANTPDALEYLAERYGFACVSINVRKSAAPELADSFEFQGLSYQ*
Ga0153698_166921	F025978	N/A	MPSFPADRFDVFKNAVMVELANRKNTHDAIWGIDRLVWLVDSELREKVWLQLERVWKAQESRDDEKLNKAVRGMCKAYQAMEDWAAANGVSELPDLGQIEHQREDGTVFVIVPDEKSKQLYCQQWPGSTDREVWTAAEIAIIVNKQAGGKISEIKQLWPDSKLVAVCGPSGFDDMENDLDMTKPSTMPKLFDTKAFKGAR*
Ga0153698_16694	F091603	AGGA	MTIGRFANGNDSKRRVLGLVGEWSPREKLPGEAQPPAISIWRQPVYQPPKMDTPRPGANDHLQIRSRGV*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0153698_1669

Overview

Ecosystem & Geography

Associated Families

Sequences