Scaffold Ga0137489_1009926

Overview

Basic Information

• Taxon OID: 3300011249
• Scaffold ID: Ga0137489_1009926
• Source Dataset Name: Basal ice microbial communities from dark ice on Arctic glacier surface, Midre Lovenbreen, Svalbard, Norway (sample 23)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Bristol
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1434
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Basal Ice → Metagenomes Of Arctic Soils

Source Dataset Sampling Location

• Location Name: Midre Lovenbreen Svalbard, Norway
• Coordinates
  • Lat. (^o): 79.48416667
  • Long. (^o): 12.09222222
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F079536	Metagenome / Metatranscriptome	115	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0137489_10099262	F079536	N/A	MDSPIPAVGSGHANDVMLKQLGEVTVDASRLEHLAVEIARNLKIDAGTPDAVAVLRRADAVPPPWSTVTSKDIAAWASSTGRLLEIRDRMFEASGGSRFAGSRGDTIATESADGTVFPADEEYLARYLKRLERQLAAGAELQSRLDYHDENGQRWPLVTLYSQRDSGENTEQPPMRLPAEWTRWLSA*