Basic Information | |
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Taxon OID | 3300011227 Open in IMG/M |
Scaffold ID | Ga0137475_100289 Open in IMG/M |
Source Dataset Name | Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 10 - S13.1.50.a - transect 1, age 50 years, surface depth). |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Bristol |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5546 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (20.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils |
Source Dataset Sampling Location | ||||||||
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Location Name | Midre Lovenbreen Svalbard, Norway | |||||||
Coordinates | Lat. (o) | 78.92777778 | Long. (o) | 12.25416667 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F018331 | Metagenome / Metatranscriptome | 235 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0137475_1002892 | F018331 | N/A | VPENNHVRADCRIHFYNGAMTTRAGLEAEAITRLTEDIEPRAVRAILVQCLAGELAPSTAITQMLDASGAATVRLVIDDVTHRAATISRASDMLVHDRVDELTQVFVETVAAIAEINEAARSRSRPKQADLLRESTDPGAA* |
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