Scaffold Ga0151515

Basic Information
Taxon OID	3300011114 Open in IMG/M
Scaffold ID	Ga0151515_10716 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011114 Open in IMG/M

Scaffold ID

Ga0151515_10716 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	13893
Total Scaffold Genes	18 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (22.22%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (20.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

13893

Total Scaffold Genes

18 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

4 (22.22%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

1 (20.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

Zoom:	Powered by OpenStreetMap^©

Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007030	Metagenome / Metatranscriptome	359	Y
F010991	Metagenome / Metatranscriptome	296	Y
F022396	Metagenome / Metatranscriptome	214	Y
F063486	Metagenome / Metatranscriptome	129	Y
F091372	Metagenome	107	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0151515_107161	F063486	N/A	MTILWLIERLLVKPTEGTLTDVVITADWRCNGSQESFSGTCYGSCS
Ga0151515_1071611	F010991	N/A	MLGKKDKKPSLNDVALKAGTDRNRVAAALRDDPDLPKEFKDKVKKAVKAVGYVKPPPNQHPNSKLDQEKADTIVEGMIQNKSITTISNEVGLDAHTTSKYIRGVKVPKDYPDNEEDWRKDVVGFLEVAIWKGTKRLAEESMQFIDDRSLPVAVAVLTDKLAATKGQPTSIHLSMTASVNHRELMADLRDRNVTTVNEEQIPDGA*
Ga0151515_1071612	F007030	N/A	MNNPTAAINMNDPFIHAPQPKAIIQEPTATGTRPSIHVSLYAYGGLSAACMMSWVDLTATFARSDRQTDLRTIREDALISRSRCRATKWFLDSGKDVWVQLDHDIEFAAADVIRMAELAYAHQATVCIPYPCRSLPPRPALRPNAEHLQALKHQVNSAECAAELVPITMFASGCLAITRRCLMSALDTLGGSTVQRPHKIDWCEDVKVERFPTLWMPMAMESLPGKLEYLSEDYAASVRMSLCDVKHFSMKPKKQLNHWGEYPFSFAPYAG*
Ga0151515_1071613	F091372	N/A	MTKYDLHRTKLLNEAPRLIQWAIAKGLMSYPITTKYHEDGSINPDIEEEIHVDPDQYTPEFCQRAYELRQLGLTLDDTAKVIGVSRGSITYILAKGHEALLTADRIKHDLKQP*
Ga0151515_107164	F022396	AGAAG	MNTGSNRQLAGEYGGKFIDASLGTVTGDFMEIKAVATTILGAVTCNITNFPSGVTVQAGDSISGVFTSVAVSSGQLVAYNRKYV*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151515_10716

Overview

Ecosystem & Geography

Associated Families

Sequences