Scaffold Ga0151517

Basic Information
Taxon OID	3300011113 Open in IMG/M
Scaffold ID	Ga0151517_1427 Open in IMG/M
Source Dataset Name	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Sep
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011113 Open in IMG/M

Scaffold ID

Ga0151517_1427 Open in IMG/M

Source Dataset Name

Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Sep

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	15763
Total Scaffold Genes	36 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	28 (77.78%)
Novel Protein Genes	7 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	6 (85.71%)
Associated Families	7

Scaffold Components

Scaffold Length (bps)

15763

Total Scaffold Genes

36 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

28 (77.78%)

Novel Protein Genes

7 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

6 (85.71%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Gangwon-do, South Korea
Coordinates	Lat. (^o)	37.947421	Long. (^o)	127.818872	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

Gangwon-do, South Korea

Coordinates

Lat. (^o)

37.947421

Long. (^o)

127.818872

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004430	Metagenome / Metatranscriptome	438	Y
F038244	Metagenome	166	Y
F049630	Metagenome	146	N
F061843	Metagenome	131	N
F064712	Metagenome	128	N
F077222	Metagenome	117	Y
F093846	Metagenome	106	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0151517_14271	F004430	N/A	MATGAEVLNMLIPTGGWVITGDEYEGIKFLEAEPITKTQYEAGFAKVDELKAQENAAKAAAKAALLEKLGISEDEARLLLA*
Ga0151517_142712	F077222	AGGA	VRILWAVLTALVAIGKGRRPLPWAILGFIGGWVALGVACLSRQRPLRPVPSWALNWGYRSQAKRAVARIDTPKDLLG*
Ga0151517_142718	F093846	AGGGGG	MEIAIVIGAAGLALVGASIASSLTNGTDDWAGQVKKAEKSRAKMKKALNK*
Ga0151517_142719	F061843	AGG	MSQNWSEVFRIFISNDGSYHLYLEEQEACIDLIENVSNEIDVSDFAEMQKASKADLRDDFATMRLDNVRKNLPPMALKVAKLTERELLDLAQEIIQVVQDKNKLQLEIVK*
Ga0151517_14272	F038244	GGA	MPISSSQVTVTTSPTLLVSGDGVAEGVYLHSKHTVYLGGSDVTSSTGYQMDNGDKLTINNHESPIYAVAGTGTGTVQVLVVTK*
Ga0151517_142732	F064712	AGG	MNYLDFKAINCRACGKLIWAGVSSAGFPTKLDIERLNILEEIVKKVSQIRTYEAHRTLVSFEVTPRMGAYVIGSEFKPERVILAEHKCSTFTLFETEPPDYWNRKINQKPTLEEIPF*
Ga0151517_142733	F049630	GAG	MKVKSSLIELPDLHFESQMFITPGRSGSGKASAERSIGVNVSALDFSVATDLLRTLHSWEVIIRADRKLTPPALVAKEPTIDAEVQATVDFHCSHLEWSLAQEWAVEFASEVYGLHAKGRSAAKRFTEQARRIPCPTDDCKRFVVIDVENLMDDVSCFGCKQSWSVIRLIALAMSNPDRKFYLDVEAIAAWMGTTERTVYNLIKTHKVERRGSLYDLSAIIKARNSTL*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0151517_1427

Overview

Ecosystem & Geography

Associated Families

Sequences