Scaffold Ga0138905_1287668

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0138905_1287668

Scaffold Ga0138905_1287668

Overview

Basic Information
Taxon OID	3300010947 Open in IMG/M
Scaffold ID	Ga0138905_1287668 Open in IMG/M
Source Dataset Name	Termite gut microbial communities - laboratory nests. Combined Assembly of Gp0151227, Gp0151152, Gp0151149, Gp0151146
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Luxembourg, Luxembourg Institute of Science and Technology
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	764
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut → Multi-Omic Termite Study

Source Dataset Sampling Location
Location Name	France
Coordinates	Lat. (^o)	48.913957	Long. (^o)	2.485499	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F008365	Metagenome	334	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0138905_12876682	F008365	GGA	MDPLITEAIELEMYPYNMKRDDGLNMGKSWKPLLHLLKERRQPPGTQ*

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