3300010947: Termite gut microbial communities - laboratory nests. Combined Assembly of Gp0151227, Gp0151152, Gp0151149, Gp0151146

Overview

Basic Information

• IMG/M Taxon OID: 3300010947
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0120447 | Gp0151146 | Ga0138905
• Sample Name: Termite gut microbial communities - laboratory nests. Combined Assembly of Gp0151227, Gp0151152, Gp0151149, Gp0151146
• Sequencing Status: Permanent Draft
• Sequencing Center: University of Luxembourg, Luxembourg Institute of Science and Technology
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 221304184
• Sequencing Scaffolds: 9
• Novel Protein Genes: 9
• Associated Families: 9

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
Not Available	7
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blaberoidea → Ectobiidae → Blattellinae → Blattella → Blattella germanica	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Multi-Omic Termite Study
• Type: Host-Associated
• Taxonomy: Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut → Multi-Omic Termite Study

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Unclassified

Location Information

• Location: France
• Coordinates
  • Lat. (^o): 48.913957
  • Long. (^o): 2.485499
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000394	Metagenome	1186	Y
F001002	Metagenome	809	Y
F003069	Metagenome	509	Y
F006796	Metagenome	364	Y
F008365	Metagenome	334	Y
F011413	Metagenome	291	Y
F014340	Metagenome	264	Y
F050745	Metagenome	145	Y
F075418	Metagenome	119	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0138905_1094487	All Organisms → cellular organisms → Eukaryota → Opisthokonta	538
Ga0138905_1214773	Not Available	2257
Ga0138905_1287668	Not Available	764
Ga0138905_1339150	Not Available	1251
Ga0138905_1351502	Not Available	864
Ga0138905_1352772	Not Available	510
Ga0138905_1361879	Not Available	509
Ga0138905_1533091	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blaberoidea → Ectobiidae → Blattellinae → Blattella → Blattella germanica	557
Ga0138905_1566507	Not Available	504

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0138905_1094487	Ga0138905_10944871	F003069	NNWSQWNSSEKLKEKFGSGTRKTFDRFTTKDSYTWNIIHNTQSTAV*
Ga0138905_1214773	Ga0138905_12147731	F075418	VHRNIITNYSQQDAAFLNLFIFTDSLHVSGGSSTHHQEFHLIHGS
Ga0138905_1287668	Ga0138905_12876682	F008365	MDPLITEAIELEMYPYNMKRDDGLNMGKSWKPLLHLLKERRQPPGTQ*
Ga0138905_1339150	Ga0138905_13391502	F050745	MFFKRLVLGKGGVDDVRREPADSSDNAVSVAMAHWNVEHRVFAVEQFFLETVIL*
Ga0138905_1351502	Ga0138905_13515021	F014340	QQDAATSQVYYNRPDHDQQHCYHHAPTVNPEAATAFVVAPDDGHEDARNMLSCI*
Ga0138905_1352772	Ga0138905_13527721	F000394	MLYIYIYMERPLLMFPDHTQRRSTVGRTPPDERPARRRD
Ga0138905_1361879	Ga0138905_13618791	F006796	SLRGSMGTGTKRDESSIGRVWAARFYHVTARSRLARVLKLMNRLFL*
Ga0138905_1533091	Ga0138905_15330911	F011413	MNKCVPLTKRSQGRPKYGWEDNITQDICQMKIKNWIACVQDQGKWKEVVEKAKTFR*
Ga0138905_1566507	Ga0138905_15665072	F001002	CLKVNNLTLILLTKENGELLIMPANRRWDLIRALKG*